BRADI3G09250 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G09250 T33221_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G09250.1 RRM 167 234
BRADI3G09250.1 RRM 264 332

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.942
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.942
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.905
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.869
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.832
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.832
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.818
GRMZM2G118590 Zea mays GRMZM2G118590 N 0.818
SB10G021290 Sorghum bicolor Sb10g021290 N 0.818
ppa009298m Prunus persica ppa009298m N 0.796
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.796
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.788
29485.m000140 Ricinus communis 29485.m000140 N 0.788
30068.m002593 Ricinus communis 30068.m002593 N 0.788
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.781
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.781
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.781
MDP0000233630 Malus x domestica MDP0000233630 N 0.781
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.781
PK04894.1 Cannabis sativa PK04894.1 N 0.781
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.781
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.781
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.781
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.781
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.781
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.781
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.781
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.774
ppa006808m Prunus persica ppa006808m N 0.774
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.774
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.774
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.774
PK12463.1 Cannabis sativa PK12463.1 N 0.774
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.766
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.766
PK28889.1 Cannabis sativa PK28889.1 N 0.766
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.766
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.766
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.766
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.759
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.759
SB07G001560 Sorghum bicolor Sb07g001560 N 0.759
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.759
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.759
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.752
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.752
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.752
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.752
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.752
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.752
mgf013366m Mimulus guttatus mgf013366m N 0.752
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.752
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.745
mgf012896m Mimulus guttatus mgf012896m N 0.745
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.737
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.737
SB03G002180 Sorghum bicolor Sb03g002180 N 0.737
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.737
29650.m000268 Ricinus communis 29650.m000268 N 0.737
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.737
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.730
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.730
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.730
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.730
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.723
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.723
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.715
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.715
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.701