Srsf7 (Mus musculus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSMUSG00000024097 T07288_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		1.000
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000066393 RRM 41 106
ENSMUSP00000066393 CCHC ZF 132 148
ENSMUSP00000070983 RRM 13 78
ENSMUSP00000070983 CCHC ZF 104 120
ENSMUSP00000108040 RRM 13 78
ENSMUSP00000108040 CCHC ZF 104 120

Links

Other CCHC ZF,RRM family RBPs
Other Mus musculus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9GYL2_POPTR Populus trichocarpa POPTR_0003s21780 N 0.000
Cucsa.142970 Cucumis sativus Cucsa.142970 N 0.000
Cucsa.242740 Cucumis sativus Cucsa.242740 N 0.000
Cucsa.263980 Cucumis sativus Cucsa.263980 N 0.000
GRMZM2G071034 Zea mays GRMZM2G071034 N 0.000
GRMZM2G110402 Zea mays GRMZM2G110402 N 0.000
GRMZM2G124476 Zea mays GRMZM2G124476 N 0.000
GRMZM2G151689 Zea mays GRMZM2G151689 N 0.000
GSVIVG00001369001 Vitis vinifera GSVIVG00001369001 N 0.000
GSVIVG00025360001 Vitis vinifera GSVIVG00025360001 N 0.000
LOC_Os02g10080 Oryza sativa LOC_Os02g10080 N 0.000
LOC_Os04g57010 Oryza sativa LOC_Os04g57010 N 0.000
MDP0000263392 Malus x domestica MDP0000263392 N 0.000
PDK_20s1321721g007 Phoenix dactylifera PDK_20s1321721g007 N 0.000
Sb10g024330 Sorghum bicolor Sb10g024330 N 0.000