CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PCBP3
(
Canis familiaris
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCAFG00000011907
T18470_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000010187
KH
15
75
TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMI
ENSCAFP00000010187
KH
99
162
TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI
ENSCAFP00000017524
KH
15
75
TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMI
ENSCAFP00000017524
KH
99
162
TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI
Links
Other
KH
family RBPs
Other
Canis familiaris
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A6MK33_CALJA
Callithrix jacchus
ENSCJAG00000005783
I
0.000
ENSACAG00000009819
Anolis carolinensis
ENSACAG00000009819
I
0.000
ENSGACG00000003044
Gasterosteus aculeatus
ENSGACG00000003044
I
0.000
ENSMGAG00000006794
Meleagris gallopavo
ENSMGAG00000006794
I
0.000
ENSORLG00000014385
Oryzias latipes
ENSORLG00000014385
I
0.000
ENSPPYG00000013822
Pongo pygmaeus
ENSPPYG00000013822
I
0.000
ENSTRUG00000017789
Takifugu rubripes
ENSTRUG00000017789
I
0.888
LOC100050101
Equus caballus
ENSECAG00000012413
I
0.000
LOC100060660
Equus caballus
ENSECAG00000024218
I
0.000
LOC100408015
Callithrix jacchus
ENSCJAG00000001903
I
0.000
Pcbp3
Rattus norvegicus
ENSRNOG00000001245
I
1.000
PCBP3
Gallus gallus
ENSGALG00000013155
I
0.000
PCBP3
Macaca mulatta
ENSMMUG00000003825
I
0.000
PCBP3
Takifugu rubripes
ENSTRUG00000013604
I
0.976
Pcbp3
Mus musculus
ENSMUSG00000001120
D
1.000
PCBP3
Takifugu rubripes
ENSTRUG00000006280
I
0.000
PCBP3
Oryctolagus cuniculus
ENSOCUG00000002696
I
0.000
PCBP3
Oryzias latipes
ENSORLG00000000059
I
0.000
PCBP3
Tursiops truncatus
ENSTTRG00000015075
I
0.000
PCBP3
Tetraodon nigroviridis
ENSTNIG00000010615
I
0.000
PCBP3
Pan troglodytes
ENSPTRG00000014010
I
0.000
PCBP3
Meleagris gallopavo
ENSMGAG00000001883
I
0.000
PCBP3
Macropus eugenii
ENSMEUG00000012960
I
0.000
PCBP3
Homo sapiens
ENSG00000183570
I
0.000
PCBP3
Gasterosteus aculeatus
ENSGACG00000002266
I
0.000
PCBP3
Cavia porcellus
ENSCPOG00000003648
I
0.000
PCBP3
Anolis carolinensis
ENSACAG00000004607
I
0.000
PCBP3
Gasterosteus aculeatus
ENSGACG00000014955
I
0.000
PCBP3
Gorilla gorilla
ENSGGOG00000003683
I
0.000
PCBP3-2
Taeniopygia guttata
ENSTGUG00000008158
I
0.000
PCBP4
Takifugu rubripes
ENSTRUG00000007426
I
0.824
PCBP4
Taeniopygia guttata
ENSTGUG00000006393
I
0.000
PCBP4
Anolis carolinensis
ENSACAG00000011701
I
0.000
Pcbp4
Rattus norvegicus
ENSRNOG00000012406
I
0.000
PCBP4
Cavia porcellus
ENSCPOG00000014617
I
0.000
PCBP4
Pan troglodytes
ENSPTRG00000014983
I
0.000
PCBP4
Canis familiaris
ENSCAFG00000010019
I
0.000
PCBP4
Gorilla gorilla
ENSGGOG00000012474
I
0.000
PCBP4
Macaca mulatta
ENSMMUG00000022205
I
0.000
Pcbp4
Mus musculus
ENSMUSG00000023495
I
0.000
PCBP4
Ornithorhynchus anatinus
ENSOANG00000014110
I
0.000
PCBP4
Gasterosteus aculeatus
ENSGACG00000002664
I
0.000
PCBP4
Oryctolagus cuniculus
ENSOCUG00000025336
I
0.000
PCBP4
Homo sapiens
ENSG00000090097
I
0.808
PCBP4
Tetraodon nigroviridis
ENSTNIG00000017887
I
0.000
PCBP4_BOVIN
Bos taurus
ENSBTAG00000018622
I
0.000
Q17QV0_BOVIN
Bos taurus
ENSBTAG00000030775
I
0.000