HNRNPK (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000010659 T19646_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
hnRNPK
M026_0.6 		Homo sapiens CCAWMCC RNAcompete
Ray et al.(2013)
RNCMPT00026 		0.915
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000026905 KH 44 104
ENSTRUP00000026905 KH 122 185
ENSTRUP00000026905 KH 372 434
ENSTRUP00000026906 KH 44 104
ENSTRUP00000026906 KH 122 185
ENSTRUP00000026906 KH 361 423
ENSTRUP00000026907 KH 44 104
ENSTRUP00000026907 KH 122 185
ENSTRUP00000026907 KH 351 413
ENSTRUP00000026908 KH 44 72
ENSTRUP00000026909 KH 45 105
ENSTRUP00000026909 KH 123 186
ENSTRUP00000026909 KH 381 443
ENSTRUP00000026910 KH 45 105
ENSTRUP00000026910 KH 145 208
ENSTRUP00000026910 KH 403 465
ENSTRUP00000026911 KH 45 105
ENSTRUP00000026911 KH 123 186
ENSTRUP00000026911 KH 381 443
ENSTRUP00000026912 KH 1 63
ENSTRUP00000026912 KH 188 250

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB26047 Xenopus laevis AAB26047 I 0.899
AAH44711 Xenopus laevis AAH44711 I 0.904
Ame_R002812 Ailuropoda melanoleuca Ame_R002812 I 0.915
D3ZJL5_RAT Rattus norvegicus ENSRNOG00000029014 I 0.803
ENSCPOG00000005024 Cavia porcellus ENSCPOG00000005024 I 0.761
ENSMMUG00000018871 Macaca mulatta ENSMMUG00000018871 I 0.915
ENSMODG00000008402 Monodelphis domestica ENSMODG00000008402 I 0.915
ENSOCUG00000025925 Oryctolagus cuniculus ENSOCUG00000025925 I 0.846
ENSPPYG00000013626 Pongo pygmaeus ENSPPYG00000013626 I 0.862
ENSPPYG00000019327 Pongo pygmaeus ENSPPYG00000019327 I 0.915
ENSRNOG00000013016 Rattus norvegicus ENSRNOG00000013016 I 0.803
ENSTTRG00000004906 Tursiops truncatus ENSTTRG00000004906 I 0.904
Gm7964 Mus musculus ENSMUSG00000063902 I 0.904
HNRNPK Procavia capensis ENSPCAG00000016196 I 0.761
HNRNPK Oryzias latipes ENSORLG00000004704 I 0.798
HNRNPK Pan troglodytes ENSPTRG00000021061 I 0.915
HNRNPK Ochotona princeps ENSOPRG00000015723 I 0.761
HNRNPK Pteropus vampyrus ENSPVAG00000009078 I 0.862
HNRNPK Oryzias latipes ENSORLG00000005161 I 0.957
Hnrnpk Rattus norvegicus ENSRNOG00000019113 I 0.915
hnrnpk Xenopus tropicalis ENSXETG00000011722 I 0.883
HNRNPK Tursiops truncatus ENSTTRG00000016693 I 0.920
HNRNPK Tarsius syrichta ENSTSYG00000001196 I 0.915
hnRNPK Homo sapiens ENSG00000165119 D 0.915
HNRNPK Takifugu rubripes ENSTRUG00000000535 I 0.966
HNRNPK Tetraodon nigroviridis ENSTNIG00000007554 I 0.761
HNRNPK Tetraodon nigroviridis ENSTNIG00000006005 I 1.000
HNRNPK Taeniopygia guttata ENSTGUG00000003138 I 0.915
HNRNPK Tupaia belangeri ENSTBEG00000001289 I 0.899
HNRNPK Sorex araneus ENSSARG00000010320 N 0.881
HNRNPK Otolemur garnettii ENSOGAG00000007478 I 0.915
HNRNPK Anolis carolinensis ENSACAG00000001479 I 0.910
HNRNPK Dasypus novemcinctus ENSDNOG00000000026 N 0.898
HNRNPK Equus caballus ENSECAG00000025104 I 0.915
HNRNPK Erinaceus europaeus ENSEEUG00000014624 I 0.910
HNRNPK Echinops telfairi ENSETEG00000016294 I 0.910
HNRNPK Felis catus ENSFCAG00000014862 I 0.867
HNRNPK Callithrix jacchus ENSCJAG00000003750 I 0.915
HNRNPK Gasterosteus aculeatus ENSGACG00000007581 I 0.963
HNRNPK Gasterosteus aculeatus ENSGACG00000016211 N 0.898
HNRNPK Gallus gallus ENSGALG00000012591 I 0.915
HNRNPK Choloepus hoffmanni ENSCHOG00000010832 I 0.915
HNRNPK Gorilla gorilla ENSGGOG00000015500 I 0.915
HNRNPK Loxodonta africana ENSLAFG00000026567 I 0.910
HNRNPK Macropus eugenii ENSMEUG00000006975 I 0.915
HNRNPK Meleagris gallopavo ENSMGAG00000006302 N 0.841
HNRNPK Monodelphis domestica ENSMODG00000018992 I 0.915
Hnrnpk Mus musculus ENSMUSG00000021546 I 0.915
HNRNPK Ornithorhynchus anatinus ENSOANG00000014612 I 0.915
hnrnpk Danio rerio ENSDARG00000018914 I 0.915
hnrpkl Danio rerio ENSDARG00000007034 I 0.920
HNRPK_BOVIN Bos taurus ENSBTAG00000021131 I 0.920
HNRPK_CHICK Gallus gallus ENSGALG00000014366 I 0.910
HNRPK_RABIT Oryctolagus cuniculus ENSOCUG00000010364 I 0.915
XM_533511.2 Canis familiaris ENSCAFG00000001399 I 0.894
XM_855974.1 Canis familiaris ENSCAFG00000017503 I 0.878