PNO1_IXOSC (Ixodes scapularis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ISCW023560 T20125_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW023560-PA KH 159 207

Links

Other KH family RBPs
Other Ixodes scapularis RBPs

101 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28525.m000262 Ricinus communis 28525.m000262 N 0.700
AAEL011832 Aedes aegypti AAEL011832 N 0.700
AAH42279 Xenopus laevis AAH42279 N 0.780
AAQ24169 Xenopus laevis AAQ24169 N 0.780
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.800
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.780
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.700
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.700
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.820
Bm1_42995 Brugia malayi Bm1_42995 N 0.740
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.700
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.760
CPIJ015853 Culex quinquefasciatus CPIJ015853 N 0.720
CPIJ019677 Culex quinquefasciatus CPIJ019677 N 0.720
CpipJ_CPIJ015853 Culex pipiens CpipJ_CPIJ015853 N 0.720
CpipJ_CPIJ019677 Culex pipiens CpipJ_CPIJ019677 N 0.720
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.780
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.714
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.800
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.740
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.800
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.780
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.780
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.780
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.760
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.720
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.700
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.714
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.760
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.714
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.735
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.800
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.760
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.760
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.760
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.780
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.780
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.824
GD17488 Drosophila simulans FBgn0189040 N 0.824
GE17874 Drosophila yakuba FBgn0068478 N 0.824
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.780
GF20246 Drosophila ananassae FBgn0097253 N 0.824
GG19285 Drosophila erecta FBgn0111489 N 0.824
GH12628 Drosophila grimshawi FBgn0120107 N 0.824
GI11042 Drosophila mojavensis FBgn0133805 N 0.804
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.735
GJ15820 Drosophila virilis FBgn0203007 N 0.824
GK20148 Drosophila willistoni FBgn0222145 N 0.804
GM23025 Drosophila sechellia FBgn0177893 N 0.824
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.714
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.824
LOAG_05624 Loa loa LOAG_05624 N 0.740
LOC100061904 Equus caballus ENSECAG00000011263 N 0.780
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.780
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.780
PHUM356890 Pediculus humanus PHUM356890 N 0.740
pno1 Dictyostelium discoideum DDB_G0287557 N 0.735
Pno1 Mus musculus ENSMUSG00000020116 N 0.760
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.800
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.780
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.780
PNO1 Microcebus murinus ENSMICG00000010897 N 0.780
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.780
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.780
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.780
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.780
PNO1 Homo sapiens ENSG00000115946 N 0.780
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.780
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.780
pno1 Danio rerio ENSDARG00000008502 N 0.780
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.780
PNO1 Canis familiaris ENSCAFG00000003256 N 0.780
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.780
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.780
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.780
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.780
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.780
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.800
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.800
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.760
PNO1 Sus scrofa ENSSSCG00000008352 N 0.780
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.780
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.780
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.780
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.780
PNO1 Procavia capensis ENSPCAG00000016146 N 0.780
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.780
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.780
PPA25260 Pristionchus pacificus PPA25260 N 0.714
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.700
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.780
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.780
Q8AVH4 Xenopus laevis Q8AVH4 N 0.780
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.740
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.780
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.740
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.780
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.780
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.800
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.780
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.780