estExt_fgenesh2_pm.C_sca_70005 (Lottia gigantea)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_fgenesh2_pm.C_sca_70005 T20900_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pm.C_sca_70005 KH 169 218

Links

Other KH family RBPs
Other Lottia gigantea RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.860
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.860
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.860
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.860
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.840
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.840
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.840
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.840
PNO1 Microcebus murinus ENSMICG00000010897 N 0.840
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.840
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.840
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.840
PNO1 Canis familiaris ENSCAFG00000003256 N 0.840
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.840
pno1 Danio rerio ENSDARG00000008502 N 0.840
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.840
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.840
LOC100061904 Equus caballus ENSECAG00000011263 N 0.840
PNO1 Homo sapiens ENSG00000115946 N 0.840
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.840
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.840
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.840
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.840
PNO1 Sus scrofa ENSSSCG00000008352 N 0.840
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.840
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.840
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.840
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.840
PNO1 Procavia capensis ENSPCAG00000016146 N 0.840
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.840
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.840
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.840
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.840
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.840
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.840
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.840
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.840
AAQ24169 Xenopus laevis AAQ24169 N 0.840
AAH42279 Xenopus laevis AAH42279 N 0.840
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.840
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.840
Q8AVH4 Xenopus laevis Q8AVH4 N 0.840
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.820
Pno1 Mus musculus ENSMUSG00000020116 N 0.820
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.820
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.820
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.820
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.820
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.820
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.800
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.800
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.800
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.800
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.800
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.780
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.760
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.760
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.760
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.760
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.740
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.740
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.740
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.740
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.740
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.740
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.740
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.740
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.740
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.740
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.740
GJ15820 Drosophila virilis FBgn0203007 N 0.725
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.725
GH12628 Drosophila grimshawi FBgn0120107 N 0.725
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.720
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.720
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.720
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.720
PHUM356890 Pediculus humanus PHUM356890 N 0.720
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.720
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.720
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.720
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.720
Bm1_42995 Brugia malayi Bm1_42995 N 0.720
LOAG_05624 Loa loa LOAG_05624 N 0.720
PMAA_046470 Penicillium marneffei PMAA_046470 N 0.720
GF20246 Drosophila ananassae FBgn0097253 N 0.706
GG19285 Drosophila erecta FBgn0111489 N 0.706
GI11042 Drosophila mojavensis FBgn0133805 N 0.706
GK20148 Drosophila willistoni FBgn0222145 N 0.706
GD17488 Drosophila simulans FBgn0189040 N 0.706
GM23025 Drosophila sechellia FBgn0177893 N 0.706
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.706
GE17874 Drosophila yakuba FBgn0068478 N 0.706
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.700
orf19.7618 Candida albicans orf19.7618 N 0.700
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.700
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.700
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.700
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.700
CTRG_05813 Candida tropicalis CTRG_05813 N 0.700
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.700
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.700
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.700
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.700
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.700
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.700
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.700
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.700
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.700
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.700
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.700
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.700