UM02401 (Ustilago maydis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 UM02401 T31269_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
UM02401 RRM 97 166

Links

Other RRM family RBPs
Other Ustilago maydis RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30147.m014356 Ricinus communis 30147.m014356 N 0.743
30147.m014359 Ricinus communis 30147.m014359 N 0.729
AAG36902 Xenopus laevis AAG36902 I 0.700
AAH45063 Xenopus laevis AAH45063 I 0.700
AAH73657 Xenopus laevis AAH73657 I 0.700
AAR26262 Xenopus laevis AAR26262 I 0.700
AB03725.1 Alternaria brassicicola AB03725.1 N 0.714
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.814
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.814
amel4_ncbi_hmm446 Apis mellifera amel4_ncbi_hmm446 I 0.714
An08g01040 Aspergillus niger CADANGAG00006423 N 0.800
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.814
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.800
Aqu1.225190 Amphimedon queenslandica Aqu1.225190 I 0.704
ATPABN1 Arabidopsis thaliana AT5G51120-TAIR-G N 0.743
B9ICE3_POPTR Populus trichocarpa POPTR_0015s12230 N 0.743
B9NAP4_POPTR Populus trichocarpa POPTR_0012s11480 N 0.729
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.771
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.814
BGIOSIBCE008718 Oryza indica BGIOSIBCE008718 N 0.714
BRADI3G58600 Brachypodium distachyon BRADI3G58600 N 0.714
CAOG_03505 Capsaspora owczarzaki CAOG_03505 N 0.700
cassava18862.valid.m1 Manihot esculenta cassava18862.valid.m1 N 0.743
cassava31160.valid.m1 Manihot esculenta cassava31160.valid.m1 N 0.700
cassava44009.valid.m1 Manihot esculenta cassava44009.valid.m1 N 0.743
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.757
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.718
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.829
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.800
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.829
Cucsa.093720 Cucumis sativus Cucsa.093720 N 0.714
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.743
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.729
EDP44971.1 Malassezia globosa EDP44971.1 N 0.900
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.718
estExt_fgenesh1_pg.C_4220012 Physcomitrella patens estExt_fgenesh1_pg.C_4220012 N 0.700
estExt_fgenesh1_pm.C_10518 Schizophyllum commune estExt_fgenesh1_pm.C_10518 N 0.761
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.800
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.786
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.732
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.761
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.786
estExt_fgenesh3_pg.C_140127 Postia placenta estExt_fgenesh3_pg.C_140127 N 0.746
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.714
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.829
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.814
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.771
e_gw1.0.1424.1 Selaginella moellendorfii e_gw1.0.1424.1 N 0.714
e_gw1.26.703.1 Selaginella moellendorfii e_gw1.26.703.1 N 0.743
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.829
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.800
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.786
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.800
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.746
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.786
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.786
e_gwh2.2.847.1 Phanerochaete chrysosporium e_gwh2.2.847.1 I 0.761
e_gwW.3.612.1 Chlamydomonas reinhardtii e_gwW.3.612.1 N 0.700
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.814
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.814
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.771
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.771
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.771
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.786
Glyma05g31030.1 Glycine max Glyma05g31030.1 N 0.700
Glyma08g14240.1 Glycine max Glyma08g14240.1 N 0.700
Glyma10g33490.1 Glycine max Glyma10g33490.1 N 0.743
Glyma20g34100.1 Glycine max Glyma20g34100.1 N 0.743
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.800
GRMZM2G108919 Zea mays GRMZM2G108919 N 0.714
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.814
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.729
gw1.9.516.1 Lottia gigantea gw1.9.516.1 I 0.718
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.800
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.771
LOC_Os02g52140 Oryza sativa LOC_Os02g52140 N 0.714
LOC_Os06g11620 Oryza sativa LOC_Os06g11620 N 0.714
MCYG_08495 Microsporum canis MCYG_08495 N 0.814
MDP0000243651 Malus x domestica MDP0000243651 N 0.743
Medtr1g087160 Medicago truncatula Medtr1g087160 N 0.729
mgf005737m Mimulus guttatus mgf005737m N 0.729
mgf006490m Mimulus guttatus mgf006490m N 0.729
mgf007186m Mimulus guttatus mgf007186m N 0.700
mgf023117m Mimulus guttatus mgf023117m N 0.743
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.800
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.829
NCU03946 Neurospora crassa NCU03946 N 0.786
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.814
pab2 Schizosaccharomyces pombe SPBC16E9.12c N 0.714
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.814
PABPN1 Tetraodon nigroviridis ENSTNIG00000005369 I 0.718
PABPN1 Takifugu rubripes ENSTRUG00000006554 I 0.718
PABPN1 Oryzias latipes ENSORLG00000006136 I 0.718
PABPN1 Gasterosteus aculeatus ENSGACG00000002167 I 0.718
pabpn1 Danio rerio ENSDARG00000045373 I 0.732
PABPN1 Ornithorhynchus anatinus ENSOANG00000009218 I 0.700
PABPN1L Ornithorhynchus anatinus ENSOANG00000013901 I 0.700
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.800
PDK_20s1311211g001 Phoenix dactylifera PDK_20s1311211g001 N 0.714
PGTG_01300 Puccinia graminis PGTG_01300 N 0.757
PHUM037550 Pediculus humanus PHUM037550 I 0.700
PK23225.1 Cannabis sativa PK23225.1 N 0.743
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.829
ppa010052m Prunus persica ppa010052m N 0.743
ppa011157m Prunus persica ppa011157m N 0.714
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.814
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.714
PTTG_05043 Puccinia triticina PTTG_05043 N 0.757
Q7ZXB8 Xenopus laevis Q7ZXB8 I 0.700
Q9DDY9 Xenopus laevis Q9DDY9 I 0.700
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.800
SB01G028780 Sorghum bicolor Sb01g028780 N 0.700
Sb04g027340 Sorghum bicolor Sb04g027340 N 0.714
SJAG_04601 Schizosaccharomyces japonicus SJAG_04601 N 0.700
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.729
SOCG_03627 Schizosaccharomyces octosporus SOCG_03627 N 0.718
SPOG_04110 Schizosaccharomyces cryophilus SPOG_04110 N 0.718
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.829
SPRG_02264 Saprolegnia parasitica SPRG_02264 N 0.700
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.771
TERG_02884 Trichophyton rubrum TERG_02884 N 0.829
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.829
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.814
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.786
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.786
XM_002864051.1 Arabidopsis lyrata scaffold_801545.1 N 0.743