CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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gw1.1.256.1
(
Neurospora tetrasperma
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
gw1.1.256.1
T53084_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.1.256.1
RRM
255
325
LFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEAYSKMDSVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Neurospora tetrasperma
RBPs
184 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
elav
Drosophila virilis
FBgn0013110
I
0.000
elav
Drosophila melanogaster
FBgn0260400
D
0.000
GA18065-RA
Drosophila pseudoobscura
FBgn0078073
I
0.000
GE16581
Drosophila yakuba
FBgn0234093
I
0.000
GF22224
Drosophila ananassae
FBgn0099222
I
0.000
GI15436
Drosophila mojavensis
FBgn0138185
I
0.000
GK16120
Drosophila willistoni
FBgn0218122
I
0.000
GL20165
Drosophila persimilis
FBgn0157760
I
0.000