MDP0000299155 (Malus x domestica)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 MDP0000299155 T62539_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000299155 YTH 911 985

Links

Other YTH family RBPs
Other Malus x domestica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29890.m000285 Ricinus communis 29890.m000285 N 0.747
B9HBC4_POPTR Populus trichocarpa POPTR_0006s07970 N 0.747
B9N817_POPTR Populus trichocarpa POPTR_0018s14670 N 0.747
cassava16277.m1 Manihot esculenta cassava16277.m1 N 0.853
Cucsa.356240 Cucumis sativus Cucsa.356240 N 0.758
ECT10 Arabidopsis thaliana AT5G58190-TAIR-G N 0.725
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.713
LjSGA_011466.1 Lotus japonicus LjSGA_011466.1 N 0.723
LjT10H22.120.nd Lotus japonicus LjT10H22.120.nd N 0.787
MDP0000189157 Malus x domestica MDP0000189157 N 0.791
MDP0000199885 Malus x domestica MDP0000199885 N 0.769
mgf019821m Mimulus guttatus mgf019821m N 0.725
PDK_20s1441394g001 Phoenix dactylifera PDK_20s1441394g001 N 0.741
PDK_20s1906441g001 Phoenix dactylifera PDK_20s1906441g001 N 0.732
PK05579.1 Cannabis sativa PK05579.1 N 0.791
ppa002677m Prunus persica ppa002677m N 0.791
XM_002864508.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001450 N 0.725