MKRN1 (Tarsius syrichta)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTSYG00000009996 T03567_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000009178 CCCH ZF 1 19
ENSTSYP00000009178 CCCH ZF 23 43
ENSTSYP00000009178 CCCH ZF 147 172
ENSTSYP00000009178 CCCH ZF 305 330

Links

Other CCCH ZF family RBPs
Other Tarsius syrichta RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.929
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.779
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.731
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.938
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.900
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.875
LOC100065893 Equus caballus ENSECAG00000017929 N 0.929
MKRN1 Felis catus ENSFCAG00000013043 N 0.938
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.760
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.865
MKRN1 Homo sapiens ENSG00000133606 N 0.907
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.856
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.721
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.918
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.769
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.796
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.846
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.769
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.907
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.808
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.918
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.989
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.856
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.928
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.779
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.856
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.846
MKRN1 Sorex araneus ENSSARG00000013683 N 0.968
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.875
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.776
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.875
AAH74368 Xenopus laevis AAH74368 N 0.709
Q6GLT5 Xenopus laevis Q6GLT5 N 0.709