CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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WUBG_00259
(
Wuchereria bancrofti
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
WUBG_00259
T17916_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
WUBG_00259T0
KH
144
194
FVKRRARLIGNEGATLKAVELLTKCYIMVQGSTVAAVGPYEGLKHVRMIVE
Links
Other
KH
family RBPs
Other
Wuchereria bancrofti
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.000
fgenesh1_pm.00866_#_279
Aspergillus carbonarius
fgenesh1_pm.00866_#_279
N
0.000
ANIA_05875
Aspergillus nidulans
CADANIAG00007161
N
0.000
An02g03350
Aspergillus niger
CADANGAG00001848
N
0.000
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.000
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.000
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.000
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.000
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.000
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.725
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.000
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.000
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.000
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.000
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.000
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.000
FVEG_06170
Fusarium verticillioides
FVEG_06170
N
0.000
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.000
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.000
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.000
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.000
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.000
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.000
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.000
estExt_Genewise1.C_80450
Myceliophthora thermophila
estExt_Genewise1.C_80450
N
0.000
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.000
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.000
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.000
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.000
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.000
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.000
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.000
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.000
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.000
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.000
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.000
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.000
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.000
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.000
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.000
SJAG_00657
Schizosaccharomyces japonicus
SJAG_00657
N
0.000
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.706
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.000
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.000
estExt_fgenesh2_pm.C_40064
Thielavia terrestris
estExt_fgenesh2_pm.C_40064
N
0.000
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.000
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.706
AAH41273
Xenopus laevis
AAH41273
N
0.000
AAH72210
Xenopus laevis
AAH72210
N
0.000
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.706