CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
FVEG_06170
(
Fusarium verticillioides
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FVEG_06170
T17661_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FVEG_06170T0
KH
137
190
FVKRRQRILGPNGSTLKALELLTETYILVHGNTVSVMGPYKGLKEIRRIVEDCM
Links
Other
KH
family RBPs
Other
Fusarium verticillioides
RBPs
74 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.852
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.852
ANIA_05875
Aspergillus nidulans
CADANIAG00007161
N
0.842
estExt_Genewise1.C_80450
Myceliophthora thermophila
estExt_Genewise1.C_80450
N
0.833
estExt_fgenesh2_pm.C_40064
Thielavia terrestris
estExt_fgenesh2_pm.C_40064
N
0.833
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.833
An02g03350
Aspergillus niger
CADANGAG00001848
N
0.825
estExt_Genewise1.C_250056
Neurospora tetrasperma
estExt_Genewise1.C_250056
N
0.815
fgenesh1_pm.00866_#_279
Aspergillus carbonarius
fgenesh1_pm.00866_#_279
N
0.815
estExt_Genewise1Plus.C_120457
Neurospora discreta
estExt_Genewise1Plus.C_120457
N
0.815
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.815
NCU07041
Neurospora crassa
NCU07041
N
0.815
Pa_1_24010
Podospora anserina
Pa_1_24010
N
0.815
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.815
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.815
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.796
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.796
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.796
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.778
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.778
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.778
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.778
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.759
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.759
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.759
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.759
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.759
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.759
GSTUMT00008009001
Tuber melanosporum
GSTUMT00008009001
N
0.759
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.741
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.741
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.741
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.741
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.741
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.741
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.741
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.741
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.741
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.741
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.741
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.741
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.741
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.741
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.741
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.741
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.741
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.741
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.722
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.722
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.722
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.722
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.722
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.722
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.722
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.722
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.722
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.722
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.722
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.719
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.714
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.709
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.704
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.704
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.704
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.704
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.704
KRR1
Candida albicans
orf19.661
N
0.704
YALI0F30393g
Yarrowia lipolytica
YALI0F30393g
N
0.704
UM03241
Ustilago maydis
UM03241
N
0.704
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.704
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.704
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.704
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.702
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.702