CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TAB2
(
Gasterosteus aculeatus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSGACG00000006629
T26482_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000008777
RanBP ZF
692
720
EGLQWNCTACTFLNHPALNRCEQCEFPRH
Links
Other
RanBP ZF
family RBPs
Other
Gasterosteus aculeatus
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R001515
Ailuropoda melanoleuca
Ame_R001515
N
0.000
HNRNPH3
Anolis carolinensis
ENSACAG00000010365
N
0.000
ENSBTAG00000020513
Bos taurus
ENSBTAG00000020513
N
0.000
HNRNPH3
Bos taurus
ENSBTAG00000014316
N
0.000
estExt_gwp.C_760137
Branchiostoma floridae
estExt_gwp.C_760137
N
0.000
LOC100407750
Callithrix jacchus
ENSCJAG00000022707
N
0.000
ENSCJAG00000002042
Callithrix jacchus
ENSCJAG00000002042
N
0.000
HNRNPF
Callithrix jacchus
ENSCJAG00000016238
I
0.000
HNRNPH1
Canis familiaris
ENSCAFG00000000336
I
0.000
ENSCAFG00000023462
Canis familiaris
ENSCAFG00000023462
N
0.000
HNRNPH3
Canis familiaris
ENSCAFG00000013619
N
0.000
HNRNPH3
Cavia porcellus
ENSCPOG00000006397
N
0.000
HNRNPH3
Choloepus hoffmanni
ENSCHOG00000012954
N
0.000
ENSCHOG00000001614
Choloepus hoffmanni
ENSCHOG00000001614
N
0.000
HNRNPH3
Danio rerio
ENSDARG00000039466
I
0.000
hnrnph1l
Danio rerio
ENSDARG00000005551
I
0.000
HNRNPH3
Dasypus novemcinctus
ENSDNOG00000004881
N
0.000
HNRNPH1
Dasypus novemcinctus
ENSDNOG00000007173
N
0.000
ENSDORG00000008260
Dipodomys ordii
ENSDORG00000008260
N
0.000
Hnrnph3
Dipodomys ordii
ENSDORG00000011470
N
0.000
LOC100063127
Equus caballus
ENSECAG00000007190
N
0.000
HNRNPH3
Erinaceus europaeus
ENSEEUG00000005025
N
0.000
ENSEEUG00000013364
Erinaceus europaeus
ENSEEUG00000013364
N
0.000
Q5F3D2_CHICK
Gallus gallus
ENSGALG00000003947
N
0.000
HNRNPH1
Gasterosteus aculeatus
ENSGACG00000018352
I
0.000
HNRNPH3
Gorilla gorilla
ENSGGOG00000025378
N
0.000
HNRNPH3
Homo sapiens
ENSG00000096746
N
0.000
HNRNPH3
Loxodonta africana
ENSLAFG00000012955
N
0.000
HNRNPH1
Macaca mulatta
ENSMMUG00000010843
N
0.000
HNRNPH3
Macaca mulatta
ENSMMUG00000009792
N
0.000
HNRNPH3
Macropus eugenii
ENSMEUG00000013139
N
0.000
HNRNPH3
Meleagris gallopavo
ENSMGAG00000003795
N
0.000
ENSMICG00000016899
Microcebus murinus
ENSMICG00000016899
N
0.000
HNRNPH3
Microcebus murinus
ENSMICG00000007581
N
0.000
HNRNPH3
Monodelphis domestica
ENSMODG00000017283
N
0.000
Hnrnph3
Mus musculus
ENSMUSG00000020069
N
0.000
HNRNPH3
Myotis lucifugus
ENSMLUG00000000143
N
0.000
HNRNPH1
Ochotona princeps
ENSOPRG00000003513
N
0.000
HNRNPH3
Ochotona princeps
ENSOPRG00000014850
N
0.000
HNRNPH3
Ornithorhynchus anatinus
ENSOANG00000002260
N
0.000
HNRNPH3
Oryctolagus cuniculus
ENSOCUG00000004443
N
0.000
HNRNPH3
Pan troglodytes
ENSPTRG00000002553
N
0.000
ENSPPYG00000002397
Pongo pygmaeus
ENSPPYG00000002397
N
0.000
HNRNPH1
Procavia capensis
ENSPCAG00000006715
N
0.000
HNRNPH3
Procavia capensis
ENSPCAG00000000111
N
0.000
HNRNPH3
Pteropus vampyrus
ENSPVAG00000008037
N
0.000
Hnrnph3
Rattus norvegicus
ENSRNOG00000026849
N
0.000
HNRNPH3
Sorex araneus
ENSSARG00000013863
N
0.000
HNRNPH3
Spermophilus tridecemlineatus
ENSSTOG00000011676
N
0.000
HNRNPH3
Sus scrofa
ENSSSCG00000010238
N
0.000
HNRNPH3
Taeniopygia guttata
ENSTGUG00000003609
N
0.000
HNRNPH1
Tetraodon nigroviridis
ENSTNIG00000008997
N
0.000
HNRNPH3
Tupaia belangeri
ENSTBEG00000006114
N
0.000
HNRNPH3
Tursiops truncatus
ENSTTRG00000013322
N
0.000
HNRNPH3
Vicugna pacos
ENSVPAG00000011814
N
0.000
AAH82630
Xenopus laevis
AAH82630
N
0.000
hnrnph3
Xenopus tropicalis
ENSXETG00000023567
N
0.000