HNRNPH3 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000039466 T36136_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.738
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000057650 RRM 10 81
ENSDARP00000057650 RRM 110 179
ENSDARP00000057650 RRM 292 359
ENSDARP00000103746 RRM 105 172

Links

Other RRM family RBPs
Other Danio rerio RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.919
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.919
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.914
ENSDARG00000078651 Danio rerio ENSDARG00000078651 N 0.912
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.905
Hnrnph3 Dipodomys ordii ENSDORG00000011470 N 0.779
LOC100392844 Callithrix jacchus ENSCJAG00000019154 N 0.779
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.757
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.757
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.757
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.748
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.748
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.748
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.748
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.748
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.748
hnrnph1l Danio rerio ENSDARG00000005551 I 0.748
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.748
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.748
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.748
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.748
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.748
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.748
HNRNPH1 Homo sapiens ENSG00000169045 I 0.748
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.748
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.748
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.743
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.743
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.743
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.743
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.743
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.738
HNRNPH2 Homo sapiens ENSG00000126945 D 0.738
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.738
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.738
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.738
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.738
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.738
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.733
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.733
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.733
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.733
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.733
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.733
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.733
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.733
LOC100057665 Equus caballus ENSECAG00000023575 I 0.733
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.733
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.733
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.733
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.733
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.733
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.733
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.729
AAI10708 Xenopus laevis AAI10708 I 0.729
AAH77770 Xenopus laevis AAH77770 I 0.729
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.729
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.729
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.729
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.724
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.724
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.724
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.724
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.724
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.724
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.724
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.724
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.724
HNRNPF Sorex araneus ENSSARG00000010059 I 0.724
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.724
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.724
HNRNPF Homo sapiens ENSG00000169813 I 0.724
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.724
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.724
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.724
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.724
LOC100050002 Equus caballus ENSECAG00000003229 I 0.719
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.719
AAH70969 Xenopus laevis AAH70969 I 0.719
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.714
ENSCAFG00000023462 Canis familiaris ENSCAFG00000023462 N 0.706
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.705