Glyma07g03620.1 (Glycine max)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 Glyma07g03620.1 T27538_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma07g03620.1 RanBP ZF 3 32
Glyma07g03620.1 RanBP ZF 56 87
Glyma07g03620.1 RanBP ZF 112 143

Links

Other RanBP ZF family RBPs
Other Glycine max RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002872121.1 Arabidopsis lyrata fgenesh2_kg.6__2541__AT5G25490.1 N 0.766
XM_002882911.1 Arabidopsis lyrata fgenesh2_kg.3__1723__AT3G15680.1 N 0.830
AT3G15680 Arabidopsis thaliana AT3G15680-TAIR-G N 0.840
AT5G25490 Arabidopsis thaliana AT5G25490-TAIR-G N 0.766
BRADI3G07610 Brachypodium distachyon BRADI3G07610 N 0.766
Cucsa.096580 Cucumis sativus Cucsa.096580 N 0.894
Cucsa.105250 Cucumis sativus Cucsa.105250 N 0.798
Cucsa.162240 Cucumis sativus Cucsa.162240 N 0.830
Glyma04g07270.1 Glycine max Glyma04g07270.1 N 0.819
Glyma06g07350.1 Glycine max Glyma06g07350.1 N 0.819
Glyma08g22470.1 Glycine max Glyma08g22470.1 N 0.979
chr1.CM0442.230.nd Lotus japonicus chr1.CM0442.230.nd N 0.809
LjSGA_055231.1 Lotus japonicus LjSGA_055231.1 N 0.734
MDP0000240686 Malus x domestica MDP0000240686 N 0.926
MDP0000269288 Malus x domestica MDP0000269288 N 0.851
MDP0000876872 Malus x domestica MDP0000876872 N 0.862
cassava8165.valid.m1 Manihot esculenta cassava8165.valid.m1 N 0.851
cassava36675.valid.m1 Manihot esculenta cassava36675.valid.m1 N 0.840
cassava25023.valid.m1 Manihot esculenta cassava25023.valid.m1 N 0.830
cassava25022.valid.m1 Manihot esculenta cassava25022.valid.m1 N 0.830
cassava20678.m1 Manihot esculenta cassava20678.m1 N 0.777
Medtr3g136630 Medicago truncatula Medtr3g136630 N 0.798
BGIOSIBCE006059 Oryza indica BGIOSIBCE006059 N 0.745
LOC_Os02g10920 Oryza sativa LOC_Os02g10920 N 0.798
A9P992_POPTR Populus trichocarpa POPTR_0006s26750 N 0.851
B9GWD5_POPTR Populus trichocarpa POPTR_0003s05990 N 0.872
A9PB85_POPTR Populus trichocarpa POPTR_0001s17280 N 0.862
B9IKV1_POPTR Populus trichocarpa POPTR_0018s01490 N 0.840
ppa012687m Prunus persica ppa012687m N 0.936
ppa012737m Prunus persica ppa012737m N 0.851
29841.m002811 Ricinus communis 29841.m002811 N 0.851
29848.m004659 Ricinus communis 29848.m004659 N 0.840
Sb04g007110 Sorghum bicolor Sb04g007110 N 0.766
GSVIVG00035819001 Vitis vinifera GSVIVG00035819001 N 0.840
GSVIVG00017252001 Vitis vinifera GSVIVG00017252001 N 0.883
GRMZM2G404897 Zea mays GRMZM2G404897 N 0.702
GRMZM2G094353 Zea mays GRMZM2G094353 N 0.745
GRMZM2G116079 Zea mays GRMZM2G116079 N 0.766