ppa012737m (Prunus persica)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 ppa012737m T27869_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa012737m RanBP ZF 3 32
ppa012737m RanBP ZF 59 90
ppa012737m RanBP ZF 119 150

Links

Other RanBP ZF family RBPs
Other Prunus persica RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000876872 Malus x domestica MDP0000876872 N 0.957
MDP0000269288 Malus x domestica MDP0000269288 N 0.947
29848.m004659 Ricinus communis 29848.m004659 N 0.915
cassava8165.valid.m1 Manihot esculenta cassava8165.valid.m1 N 0.904
GSVIVG00035819001 Vitis vinifera GSVIVG00035819001 N 0.894
MDP0000240686 Malus x domestica MDP0000240686 N 0.883
Cucsa.096580 Cucumis sativus Cucsa.096580 N 0.883
A9P992_POPTR Populus trichocarpa POPTR_0006s26750 N 0.883
Glyma06g07350.1 Glycine max Glyma06g07350.1 N 0.872
Glyma04g07270.1 Glycine max Glyma04g07270.1 N 0.872
B9IKV1_POPTR Populus trichocarpa POPTR_0018s01490 N 0.872
GSVIVG00017252001 Vitis vinifera GSVIVG00017252001 N 0.872
ppa012687m Prunus persica ppa012687m N 0.872
XM_002882911.1 Arabidopsis lyrata fgenesh2_kg.3__1723__AT3G15680.1 N 0.862
Cucsa.162240 Cucumis sativus Cucsa.162240 N 0.862
B9GWD5_POPTR Populus trichocarpa POPTR_0003s05990 N 0.851
AT3G15680 Arabidopsis thaliana AT3G15680-TAIR-G N 0.851
A9PB85_POPTR Populus trichocarpa POPTR_0001s17280 N 0.851
Glyma07g03620.1 Glycine max Glyma07g03620.1 N 0.851
Glyma08g22470.1 Glycine max Glyma08g22470.1 N 0.840
Medtr3g136630 Medicago truncatula Medtr3g136630 N 0.830
29841.m002811 Ricinus communis 29841.m002811 N 0.830
AT5G25490 Arabidopsis thaliana AT5G25490-TAIR-G N 0.819
XM_002872121.1 Arabidopsis lyrata fgenesh2_kg.6__2541__AT5G25490.1 N 0.819
cassava20678.m1 Manihot esculenta cassava20678.m1 N 0.819
cassava36675.valid.m1 Manihot esculenta cassava36675.valid.m1 N 0.809
chr1.CM0442.230.nd Lotus japonicus chr1.CM0442.230.nd N 0.809
cassava25022.valid.m1 Manihot esculenta cassava25022.valid.m1 N 0.798
cassava25023.valid.m1 Manihot esculenta cassava25023.valid.m1 N 0.798
LOC_Os02g10920 Oryza sativa LOC_Os02g10920 N 0.798
BRADI3G07610 Brachypodium distachyon BRADI3G07610 N 0.798
Cucsa.105250 Cucumis sativus Cucsa.105250 N 0.787
Sb04g007110 Sorghum bicolor Sb04g007110 N 0.787
GRMZM2G116079 Zea mays GRMZM2G116079 N 0.787
GRMZM2G094353 Zea mays GRMZM2G094353 N 0.766
BGIOSIBCE006059 Oryza indica BGIOSIBCE006059 N 0.734
LOC_Os06g04920 Oryza sativa LOC_Os06g04920 N 0.702