Glyma08g22470.1 (Glycine max)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 Glyma08g22470.1 T27543_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma08g22470.1 RanBP ZF 3 32
Glyma08g22470.1 RanBP ZF 57 88
Glyma08g22470.1 RanBP ZF 114 145

Links

Other RanBP ZF family RBPs
Other Glycine max RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002872121.1 Arabidopsis lyrata fgenesh2_kg.6__2541__AT5G25490.1 N 0.766
XM_002882911.1 Arabidopsis lyrata fgenesh2_kg.3__1723__AT3G15680.1 N 0.830
AT3G15680 Arabidopsis thaliana AT3G15680-TAIR-G N 0.840
AT5G25490 Arabidopsis thaliana AT5G25490-TAIR-G N 0.766
BRADI3G07610 Brachypodium distachyon BRADI3G07610 N 0.755
Cucsa.096580 Cucumis sativus Cucsa.096580 N 0.894
Cucsa.105250 Cucumis sativus Cucsa.105250 N 0.809
Cucsa.162240 Cucumis sativus Cucsa.162240 N 0.830
Glyma04g07270.1 Glycine max Glyma04g07270.1 N 0.809
Glyma06g07350.1 Glycine max Glyma06g07350.1 N 0.809
Glyma07g03620.1 Glycine max Glyma07g03620.1 N 0.979
chr1.CM0442.230.nd Lotus japonicus chr1.CM0442.230.nd N 0.819
LjSGA_055231.1 Lotus japonicus LjSGA_055231.1 N 0.755
MDP0000240686 Malus x domestica MDP0000240686 N 0.904
MDP0000269288 Malus x domestica MDP0000269288 N 0.840
MDP0000876872 Malus x domestica MDP0000876872 N 0.851
cassava8165.valid.m1 Manihot esculenta cassava8165.valid.m1 N 0.840
cassava36675.valid.m1 Manihot esculenta cassava36675.valid.m1 N 0.840
cassava25023.valid.m1 Manihot esculenta cassava25023.valid.m1 N 0.830
cassava25022.valid.m1 Manihot esculenta cassava25022.valid.m1 N 0.830
cassava20678.m1 Manihot esculenta cassava20678.m1 N 0.787
Medtr3g136630 Medicago truncatula Medtr3g136630 N 0.798
BGIOSIBCE006059 Oryza indica BGIOSIBCE006059 N 0.734
LOC_Os02g10920 Oryza sativa LOC_Os02g10920 N 0.787
A9P992_POPTR Populus trichocarpa POPTR_0006s26750 N 0.840
B9GWD5_POPTR Populus trichocarpa POPTR_0003s05990 N 0.862
A9PB85_POPTR Populus trichocarpa POPTR_0001s17280 N 0.851
B9IKV1_POPTR Populus trichocarpa POPTR_0018s01490 N 0.830
ppa012687m Prunus persica ppa012687m N 0.936
ppa012737m Prunus persica ppa012737m N 0.840
29841.m002811 Ricinus communis 29841.m002811 N 0.851
29848.m004659 Ricinus communis 29848.m004659 N 0.830
Sb04g007110 Sorghum bicolor Sb04g007110 N 0.755
GSVIVG00035819001 Vitis vinifera GSVIVG00035819001 N 0.840
GSVIVG00017252001 Vitis vinifera GSVIVG00017252001 N 0.894
GRMZM2G094353 Zea mays GRMZM2G094353 N 0.734
GRMZM2G116079 Zea mays GRMZM2G116079 N 0.755