RALYL (Echinops telfairi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSETEG00000014028 T36981_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPC
M025_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00025 		0.812
RALY
M150_0.6 		Homo sapiens UUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00159 		0.781
HNRNPCL1
M158_0.6 		Homo sapiens HUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00167 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000011387 RRM 23 86

Links

Other RRM family RBPs
Other Echinops telfairi RBPs

129 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R015338 Ailuropoda melanoleuca Ame_R015338 N 0.000
A7MB88_BOVIN Bos taurus ENSBTAG00000002854 N 0.000
TMEM63A Callithrix jacchus ENSCJAG00000012604 N 0.000
ENSCPOG00000024507 Cavia porcellus ENSCPOG00000024507 N 0.000
TMEM63A Dasypus novemcinctus ENSDNOG00000024203 N 0.000
Tmem63a Dipodomys ordii ENSDORG00000003334 N 0.000
TMEM63A Echinops telfairi ENSETEG00000012297 N 0.000
LOC100057436 Equus caballus ENSECAG00000018566 N 0.000
TMEM63A Felis catus ENSFCAG00000006966 N 0.000
TMEM63A Gorilla gorilla ENSGGOG00000000862 N 0.000
TMEM63A Homo sapiens ENSG00000196187 N 0.000
TMEM63A Loxodonta africana ENSLAFG00000017739 N 0.000
TMEM63A Macropus eugenii ENSMEUG00000003227 N 0.000
TMEM63A Microcebus murinus ENSMICG00000004058 N 0.000
TMEM63A Monodelphis domestica ENSMODG00000005934 N 0.000
Tmem63a Mus musculus ENSMUSG00000026519 N 0.000
TMEM63A Myotis lucifugus ENSMLUG00000016338 N 0.000
TMEM63A Ochotona princeps ENSOPRG00000012151 N 0.000
TMEM63A Ornithorhynchus anatinus ENSOANG00000001474 N 0.000
TMEM63A Oryctolagus cuniculus ENSOCUG00000001907 N 0.000
TMEM63A Otolemur garnettii ENSOGAG00000010346 N 0.000
TMEM63A Pteropus vampyrus ENSPVAG00000004786 N 0.000
Tmem6 Rattus norvegicus ENSRNOG00000003310 N 0.000
TMEM63A Sus scrofa ENSSSCG00000010854 N 0.000
TMEM63A Tursiops truncatus ENSTTRG00000010132 N 0.000