PABPC1L (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000015793 T39573_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000024897 RRM 13 83
ENSOANP00000024897 RRM 101 168
ENSOANP00000024897 RRM 238 256
ENSOANP00000024897 RRM 290 358
ENSOANP00000024898 RRM 13 83
ENSOANP00000024898 RRM 101 168
ENSOANP00000024898 RRM 220 238
ENSOANP00000024898 RRM 272 340

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005305 Ailuropoda melanoleuca Ame_R005305 I 0.728
PABPC1L Anolis carolinensis ENSACAG00000011841 I 0.731
PABPC1L Bos taurus ENSBTAG00000016849 I 0.731
PABPC1L Callithrix jacchus ENSCJAG00000017628 I 0.717
PABPC1L Canis familiaris ENSCAFG00000009573 I 0.728
pabpc1l Danio rerio ENSDARG00000002597 I 0.713
LOC100070836 Equus caballus ENSECAG00000022681 I 0.720
PABPC1L Gallus gallus ENSGALG00000004123 I 0.728
PABPC1L Gorilla gorilla ENSGGOG00000004584 I 0.720
PABPC1L Homo sapiens ENSG00000101104 I 0.720
PABPC1L Loxodonta africana ENSLAFG00000003553 I 0.728
PABPC1L Macaca mulatta ENSMMUG00000013209 I 0.724
PABPC1L Macropus eugenii ENSMEUG00000007905 I 0.731
PABPC1L Meleagris gallopavo ENSMGAG00000003674 I 0.728
PABPC1L Microcebus murinus ENSMICG00000000974 I 0.710
ENSMICG00000009121 Microcebus murinus ENSMICG00000009121 I 0.827
PABPC1L Monodelphis domestica ENSMODG00000016198 I 0.746
PABPC1L Ochotona princeps ENSOPRG00000011846 I 0.724
PABPC1L Oryctolagus cuniculus ENSOCUG00000003005 I 0.720
PABPC1L Pan troglodytes ENSPTRG00000013531 I 0.720
ENSPPYG00000011042 Pongo pygmaeus ENSPPYG00000011042 I 0.720
PABPC1L Pteropus vampyrus ENSPVAG00000012663 I 0.710
PABPC1L Sus scrofa ENSSSCG00000007382 I 0.724
PABPC1L Tarsius syrichta ENSTSYG00000006645 I 0.706
PABPC1L Tursiops truncatus ENSTTRG00000007618 I 0.739
AAH71118 Xenopus laevis AAH71118 I 0.713
AAH80020 Xenopus laevis AAH80020 I 0.710
AAK29408 Xenopus laevis AAK29408 I 0.710
Q6GR16 Xenopus laevis Q6GR16 I 0.713
Q98SP8 Xenopus laevis Q98SP8 I 0.710