CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GA16600-RA
(
Drosophila pseudoobscura
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0076615
T43144_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0272562
RRM
1142
1206
LLLKNLTAQIDGPTLRTLCMQHGPLVSFHLYLNQGIALCKYTTREEASKAQMALNNCVLGNTTIF
Links
Other
RRM
family RBPs
Other
Drosophila pseudoobscura
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CHGG_02707
Chaetomium globosum
CHGG_02707
N
0.000
PTTG_11278
Puccinia triticina
PTTG_11278
N
0.000
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.000
PTTG_10809
Puccinia triticina
PTTG_10809
N
0.000
PTTG_10713
Puccinia triticina
PTTG_10713
N
0.000
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.000
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.000
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.000
PTTG_05648
Puccinia triticina
PTTG_05648
N
0.000
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.000
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.000
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.000