SB09G018610 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb09g018610 T46072_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb09g018610.1 RRM 37 106
Sb09g018610.1 RRM 125 196
Sb09g018610.1 RRM 371 441

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.757
XM_002892115.1 Arabidopsis lyrata fgenesh2_kg.1__275__AT1G03457.2 N 0.704
AT1G03457 Arabidopsis thaliana AT1G03457-TAIR-G N 0.000
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.752
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.845
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.911
PK12631.1 Cannabis sativa PK12631.1 N 0.793
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.761
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.803
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.775
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.793
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.770
MDP0000123673 Malus x domestica MDP0000123673 N 0.770
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.789
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.798
mgf010250m Mimulus guttatus mgf010250m N 0.000
mgf007780m Mimulus guttatus mgf007780m N 0.765
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.864
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.887
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.869
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.798
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.784
ppa006027m Prunus persica ppa006027m N 0.798
29647.m002041 Ricinus communis 29647.m002041 N 0.784
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.850
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.826
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.845
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.972