29742.m001371 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 29742.m001371 T48684_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29742.m001371 RRM 5 65
29742.m001371 RRM 96 159

Links

Other RRM family RBPs
Other Ricinus communis RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.792
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.816
RS31a Arabidopsis thaliana AT2G46610-TAIR-G N 0.744
RS31 Arabidopsis thaliana AT3G61860-TAIR-G N 0.784
BRADI5G01430 Brachypodium distachyon BRADI5G01430 N 0.712
PK15848.1 Cannabis sativa PK15848.1 N 0.848
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.888
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.810
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.810
MDP0000387508 Malus x domestica MDP0000387508 N 0.824
MDP0000263938 Malus x domestica MDP0000263938 N 0.824
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.944
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.944
cassava31733.valid.m1 Manihot esculenta cassava31733.valid.m1 N 0.724
cassava31732.valid.m1 Manihot esculenta cassava31732.valid.m1 N 0.724
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.810
mgf011632m Mimulus guttatus mgf011632m N 0.825
BGIOSIBCE013939 Oryza indica BGIOSIBCE013939 N 0.720
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 0.720
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.701
B9I4G0_POPTR Populus trichocarpa POPTR_0012s13920 N 0.701
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.952
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.952
B9ID09_POPTR Populus trichocarpa POPTR_0015s13880 N 0.709
ppa008137m Prunus persica ppa008137m N 0.832