RS31 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT3G61860-TAIR-G T32767_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT3G61860.1-P RRM 4 64
AT3G61860.1-P RRM 95 158

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.984
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.840
ppa008137m Prunus persica ppa008137m N 0.840
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.832
PK15848.1 Cannabis sativa PK15848.1 N 0.824
mgf011632m Mimulus guttatus mgf011632m N 0.810
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.808
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.808
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.802
MDP0000263938 Malus x domestica MDP0000263938 N 0.800
MDP0000387508 Malus x domestica MDP0000387508 N 0.800
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.794
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.792
RS31a Arabidopsis thaliana AT2G46610-TAIR-G N 0.784
29742.m001371 Ricinus communis 29742.m001371 N 0.784
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.776
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.762
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 0.720
BGIOSIBCE013939 Oryza indica BGIOSIBCE013939 N 0.720
GRMZM2G064612 Zea mays GRMZM2G064612 N 0.717
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.709
SB01G049590 Sorghum bicolor Sb01g049590 N 0.706