29813.m001513 (Ricinus communis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 29813.m001513 T20592_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29813.m001513 KH 51 107
29813.m001513 KH 162 229
29813.m001513 KH 298 354
29813.m001513 KH 383 450

Links

Other KH family RBPs
Other Ricinus communis RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.909
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.909
B9HXY8_POPTR Populus trichocarpa POPTR_0010s17430 N 0.874
B9HI86_POPTR Populus trichocarpa POPTR_0008s08810 N 0.870
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.852
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.759
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.735
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.735
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.735
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.735
PK16782.1 Cannabis sativa PK16782.1 N 0.733
mgf007265m Mimulus guttatus mgf007265m N 0.708
mgf011898m Mimulus guttatus mgf011898m N 0.708
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.706
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.705
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.704
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.703
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.701