PK16782.1 (Cannabis sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PK16782.1 T17956_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK16782.1 KH 75 131
PK16782.1 KH 172 239
PK16782.1 KH 315 369
PK16782.1 KH 401 468

Links

Other KH family RBPs
Other Cannabis sativa RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa003758m Prunus persica ppa003758m N 0.856
MDP0000573228 Malus x domestica MDP0000573228 N 0.850
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.836
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.836
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.836
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.836
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.817
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.816
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.810
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.801
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.800
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.799
mgf011898m Mimulus guttatus mgf011898m N 0.796
mgf007265m Mimulus guttatus mgf007265m N 0.796
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.794
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.794
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.793
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.793
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.783
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.776
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.768
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.750
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.746
29813.m001513 Ricinus communis 29813.m001513 N 0.733
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.714
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.714