Igf2bp1 (Dipodomys ordii)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSDORG00000014371 T22197_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.888
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.888
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.726
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.726
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000013516 RRM 4 61
ENSDORP00000013516 RRM 110 150
ENSDORP00000013516 KH 197 260
ENSDORP00000013516 KH 278 343
ENSDORP00000013516 KH 407 470
ENSDORP00000013516 KH 489 553

Links

Other KH,RRM family RBPs
Other Dipodomys ordii RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.897
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.891
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.888
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.888
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.888
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.888
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.888
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.888
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.888
IGF2BP1 Homo sapiens ENSG00000159217 D 0.888
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.886
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.886
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.886
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.886
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.878
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.871
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.863
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.855
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.850
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.820
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.807
igf2bp1 Danio rerio ENSDARG00000061478 I 0.766
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.765
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.754
AAI70224 Xenopus laevis AAI70224 I 0.744
AAC18598 Xenopus laevis AAC18598 I 0.744
AAC41285 Xenopus laevis AAC41285 I 0.744
AAI70196 Xenopus laevis AAI70196 I 0.744
AAI70479 Xenopus laevis AAI70479 I 0.744
O73932 Xenopus laevis O73932 I 0.744
AAI70477 Xenopus laevis AAI70477 I 0.744
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.741
O57526 Xenopus laevis O57526 I 0.739
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.739
AAH57700 Xenopus laevis AAH57700 I 0.739
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.739
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.739
AAC18597 Xenopus laevis AAC18597 I 0.739
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.739
AAB97457 Xenopus laevis AAB97457 I 0.739
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.728
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.726
IGF2BP3 Homo sapiens ENSG00000136231 D 0.726
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.726
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.723
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.723
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.723
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.722
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.721
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.717
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.710