IGF2BP1 (Cavia porcellus)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSCPOG00000020174 T22189_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.919
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.919
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.766
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.766
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.716
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.716
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000014618 RRM 4 39
ENSCPOP00000014618 RRM 53 120
ENSCPOP00000014618 KH 167 230
ENSCPOP00000014618 KH 248 313
ENSCPOP00000014618 KH 377 440
ENSCPOP00000014618 KH 459 523

Links

Other KH,RRM family RBPs
Other Cavia porcellus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.921
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.920
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.919
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.919
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.919
IGF2BP1 Homo sapiens ENSG00000159217 D 0.919
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.919
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.919
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.916
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.916
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.916
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.916
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.916
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.914
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.913
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.906
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.888
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.886
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.880
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.847
igf2bp1 Danio rerio ENSDARG00000061478 I 0.814
Igf2bp1 Dipodomys ordii ENSDORG00000014371 I 0.807
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.807
LOC424865 Gallus gallus ENSGALG00000006523 I 0.789
AAI70196 Xenopus laevis AAI70196 I 0.789
AAC41285 Xenopus laevis AAC41285 I 0.789
O73932 Xenopus laevis O73932 I 0.789
AAI70477 Xenopus laevis AAI70477 I 0.789
AAI70479 Xenopus laevis AAI70479 I 0.789
AAC18598 Xenopus laevis AAC18598 I 0.789
AAI70224 Xenopus laevis AAI70224 I 0.789
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.786
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.786
O57526 Xenopus laevis O57526 I 0.784
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.784
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.784
AAB97457 Xenopus laevis AAB97457 I 0.784
AAC18597 Xenopus laevis AAC18597 I 0.784
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.784
AAH57700 Xenopus laevis AAH57700 I 0.784
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.779
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.771
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.767
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.766
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.766
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.766
IGF2BP3 Homo sapiens ENSG00000136231 D 0.766
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.765
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.763
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.763
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.761
igf2bp3 Danio rerio ENSDARG00000010266 I 0.749
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.747
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.746
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.738
igf2bp2a Danio rerio ENSDARG00000003421 I 0.736
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.730
IGF2BP1 Tarsius syrichta ENSTSYG00000003912 I 0.720
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.718
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.718
IGF2BP2 Homo sapiens ENSG00000073792 D 0.716
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.716
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.716
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.716
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.708
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.706