IGF2BP1 (Oryctolagus cuniculus)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1)
IPR018111
IPR000504
ENSOCUG00000004411 T22247_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP1
M296_0.6
Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992
0.982
IGF2BP1
M293_0.6
Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350
0.982
IGF2BP3
M295_0.6
Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350
0.802
IGF2BP3
M163_0.6
Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172
0.802
IGF2BP2
M294_0.6
Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350
0.741
IGF2BP2
M032_0.6
Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033
0.741
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000003814 RRM 1 62
ENSOCUP00000003814 RRM 76 143
ENSOCUP00000003814 KH 190 253
ENSOCUP00000003814 KH 271 336
ENSOCUP00000003814 KH 400 463
ENSOCUP00000003814 KH 482 546

Links

Other KH,RRM family RBPs
Other Oryctolagus cuniculus RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity
Action
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.982
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.982
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.982
IGF2BP1 Homo sapiens ENSG00000159217 D 0.982
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.982
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.982
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.982
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.980
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.980
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.980
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.980
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.977
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.977
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.969
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.969
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.949
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.949
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.944
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.920
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.913
Igf2bp1 Dipodomys ordii ENSDORG00000014371 I 0.871
igf2bp1 Danio rerio ENSDARG00000061478 I 0.855
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.850
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.850
AAI70224 Xenopus laevis AAI70224 I 0.830
AAI70477 Xenopus laevis AAI70477 I 0.830
AAI70479 Xenopus laevis AAI70479 I 0.830
AAI70196 Xenopus laevis AAI70196 I 0.830
O73932 Xenopus laevis O73932 I 0.830
AAC41285 Xenopus laevis AAC41285 I 0.830
AAC18598 Xenopus laevis AAC18598 I 0.830
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.827
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.827
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.824
AAH57700 Xenopus laevis AAH57700 I 0.824
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.824
AAB97457 Xenopus laevis AAB97457 I 0.824
AAC18597 Xenopus laevis AAC18597 I 0.824
O57526 Xenopus laevis O57526 I 0.824
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.822
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.807
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.803
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.803
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.802
IGF2BP3 Homo sapiens ENSG00000136231 D 0.802
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.802
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.799
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.799
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.799
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.796
IGF2BP1 Tarsius syrichta ENSTSYG00000003912 I 0.789
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.782
igf2bp2a Danio rerio ENSDARG00000003421 I 0.772
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.771
igf2bp3 Danio rerio ENSDARG00000010266 I 0.767
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.761
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.753
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.744
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.744
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.744
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.741
IGF2BP2 Homo sapiens ENSG00000073792 D 0.741
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.741
LOC424865 Gallus gallus ENSGALG00000006523 I 0.741
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.739
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.730
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.725
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.723
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.716
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.714