D3ZB84_RAT (Rattus norvegicus)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSRNOG00000009052 T22266_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.975
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.975
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.807
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.807
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.746
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000012100 RRM 4 69
ENSRNOP00000012100 RRM 83 150
ENSRNOP00000012100 KH 197 260
ENSRNOP00000012100 KH 278 343
ENSRNOP00000012100 KH 407 470
ENSRNOP00000012100 KH 489 553
ENSRNOP00000044701 KH 16 78

Links

Other KH,RRM family RBPs
Other Rattus norvegicus RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.995
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.984
IGF2BP3 Canis familiaris ENSCAFG00000002766 N 0.984
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.977
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.975
IGF2BP3 Homo sapiens ENSG00000136231 D 0.975
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.972
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.967
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.954
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.888
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.888
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.881
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.880
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.880
O57526 Xenopus laevis O57526 I 0.873
AAH57700 Xenopus laevis AAH57700 I 0.873
AAB97457 Xenopus laevis AAB97457 I 0.873
AAC18597 Xenopus laevis AAC18597 I 0.873
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.873
O73932 Xenopus laevis O73932 I 0.865
AAC41285 Xenopus laevis AAC41285 I 0.865
AAC18598 Xenopus laevis AAC18598 I 0.865
AAI70479 Xenopus laevis AAI70479 I 0.865
AAI70196 Xenopus laevis AAI70196 I 0.865
AAI70224 Xenopus laevis AAI70224 I 0.865
AAI70477 Xenopus laevis AAI70477 I 0.865
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.863
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.848
igf2bp3 Danio rerio ENSDARG00000010266 I 0.830
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.822
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.819
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.817
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.809
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.809
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.809
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.807
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.807
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.807
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.807
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.807
IGF2BP1 Homo sapiens ENSG00000159217 D 0.807
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.807
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.804
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.804
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.802
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.802
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.799
igf2bp1 Danio rerio ENSDARG00000061478 I 0.799
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.796
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.794
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.792
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.791
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.784
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.779
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.766
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.763
igf2bp2a Danio rerio ENSDARG00000003421 I 0.746
IGF2BP2 Homo sapiens ENSG00000073792 D 0.746
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.746
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.746
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.746
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.744
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.741
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.726
Igf2bp1 Dipodomys ordii ENSDORG00000014371 I 0.723
LOC424865 Gallus gallus ENSGALG00000006523 I 0.723
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.705
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.703
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.703