HNRNPF (Loxodonta africana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSLAFG00000000424 T37961_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.838
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000000362 RRM 13 84
ENSLAFP00000000362 RRM 113 182
ENSLAFP00000000362 RRM 291 358

Links

Other RRM family RBPs
Other Loxodonta africana RBPs

92 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.990
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.976
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.976
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.976
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.976
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.971
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.971
LOC100050002 Equus caballus ENSECAG00000003229 I 0.971
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.971
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.971
HNRNPF Sorex araneus ENSSARG00000010059 I 0.971
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.971
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.967
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.967
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.967
HNRNPF Homo sapiens ENSG00000169813 I 0.967
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.967
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.967
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.962
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.962
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.962
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.919
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.900
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.862
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.862
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.862
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.857
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.857
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.852
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.852
HNRNPH1 Homo sapiens ENSG00000169045 I 0.852
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.852
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.852
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.852
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.852
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.852
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.852
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.852
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.852
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.852
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.852
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.852
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.852
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.843
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.843
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.843
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.843
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.838
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.838
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.838
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.838
HNRNPH2 Homo sapiens ENSG00000126945 D 0.838
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.838
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.838
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.833
LOC100057665 Equus caballus ENSECAG00000023575 I 0.833
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.833
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.833
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.833
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.833
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.833
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.833
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.833
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.833
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.833
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.833
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.833
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.833
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.833
hnrnph1l Danio rerio ENSDARG00000005551 I 0.829
AAH77770 Xenopus laevis AAH77770 I 0.829
AAI10708 Xenopus laevis AAI10708 I 0.829
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.814
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.814
AAH70969 Xenopus laevis AAH70969 I 0.810
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.800
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.786
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.776
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.771
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.771
LOC100067495 Equus caballus ENSECAG00000014429 I 0.771
HNRNPF Felis catus ENSFCAG00000006794 N 0.767
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.762
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.752
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.748
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.748
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.738
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.729
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.724
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.724
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.714
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.705