AAH70969 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH70969 T59510_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.876
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH70969 RRM 12 83
AAH70969 RRM 112 181
AAH70969 RRM 279 346

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.967
AAI10708 Xenopus laevis AAI10708 I 0.962
AAH77770 Xenopus laevis AAH77770 I 0.962
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.900
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.900
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.890
HNRNPH1 Homo sapiens ENSG00000169045 I 0.890
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.890
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.890
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.890
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.890
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.890
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.890
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.890
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.890
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.890
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.890
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.890
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.890
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.890
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.881
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.881
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.881
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.881
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.881
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.881
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.881
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.881
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.881
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.881
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.881
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.881
LOC100057665 Equus caballus ENSECAG00000023575 I 0.881
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.881
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.881
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.881
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.881
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.876
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.876
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.876
HNRNPH2 Homo sapiens ENSG00000126945 D 0.876
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.876
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.876
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.876
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.871
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.871
hnrnph1l Danio rerio ENSDARG00000005551 I 0.871
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.867
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.862
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.857
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.829
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.819
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.814
HNRNPF Sorex araneus ENSSARG00000010059 I 0.814
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.814
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.814
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.810
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.810
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.810
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.810
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.810
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.810
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.810
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.810
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.810
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.805
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.805
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.805
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.805
LOC100050002 Equus caballus ENSECAG00000003229 I 0.805
LOC100067495 Equus caballus ENSECAG00000014429 I 0.805
HNRNPF Homo sapiens ENSG00000169813 I 0.805
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.805
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.805
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.805
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.805
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.800
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.795
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.795
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.786
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.776
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.771
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.762
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.738
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.738
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.733
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.724
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.724
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.719
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.719
HNRNPH1 Pteropus vampyrus ENSPVAG00000007670 I 0.705