SPEN (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000010255 T36816_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000009383 RRM 9 74
ENSEEUP00000009383 RRM 337 407
ENSEEUP00000009383 RRM 440 505
ENSEEUP00000009383 RRM 543 583

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Bos taurus ENSBTAG00000018729 N 0.863
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.863
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.860
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.860
SPEN Homo sapiens ENSG00000065526 N 0.860
SPEN Macaca mulatta ENSMMUG00000008026 N 0.856
Spen Mus musculus ENSMUSG00000040761 N 0.856
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.856
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.852
SPEN Gallus gallus ENSGALG00000003662 N 0.852
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.852
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.827
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.815
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.814
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.808
LOC100053790 Equus caballus ENSECAG00000008833 N 0.807
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.804
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.804
SPEN Loxodonta africana ENSLAFG00000004524 N 0.804
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.804
SPEN Ochotona princeps ENSOPRG00000015800 N 0.796
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.789
SPEN Anolis carolinensis ENSACAG00000013761 N 0.789
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.786
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.786
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.786
SPEN Monodelphis domestica ENSMODG00000003411 N 0.785
SPEN Oryzias latipes ENSORLG00000018414 N 0.782
SPEN Danio rerio ENSDARG00000074332 N 0.775
SPEN Cavia porcellus ENSCPOG00000014036 N 0.763
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.763
SPEN Canis familiaris ENSCAFG00000016132 N 0.759
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.741
spen Danio rerio ENSDARG00000074245 N 0.705