SPEN (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000016132 T35137_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000023775 RRM 1 49
ENSCAFP00000023775 RRM 328 386
ENSCAFP00000023775 RRM 419 486
ENSCAFP00000023775 RRM 498 562

Links

Other RRM family RBPs
Other Canis familiaris RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Cavia porcellus ENSCPOG00000014036 N 0.971
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.963
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.953
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.952
LOC100053790 Equus caballus ENSECAG00000008833 N 0.945
SPEN Loxodonta africana ENSLAFG00000004524 N 0.941
SPEN Ochotona princeps ENSOPRG00000015800 N 0.937
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.930
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.929
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.913
SPEN Anolis carolinensis ENSACAG00000013761 N 0.913
SPEN Monodelphis domestica ENSMODG00000003411 N 0.895
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.894
SPEN Homo sapiens ENSG00000065526 N 0.886
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.886
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.886
SPEN Bos taurus ENSBTAG00000018729 N 0.882
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.882
SPEN Macaca mulatta ENSMMUG00000008026 N 0.882
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.878
Spen Mus musculus ENSMUSG00000040761 N 0.875
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.871
SPEN Gallus gallus ENSGALG00000003662 N 0.863
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.863
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.804
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.801
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.801
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.779
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.779
SPEN Danio rerio ENSDARG00000074332 N 0.779
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.776
SPEN Oryzias latipes ENSORLG00000018414 N 0.775
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.771
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.759
SPEN Macropus eugenii ENSMEUG00000002422 N 0.747
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.716
spen Danio rerio ENSDARG00000074245 N 0.701