SPEN (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000003411 T39063_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000004174 RRM 1 53
ENSMODP00000004174 RRM 317 387
ENSMODP00000004174 RRM 420 487
ENSMODP00000004174 RRM 499 563
ENSMODP00000031808 RRM 1 53
ENSMODP00000031808 RRM 317 387
ENSMODP00000031808 RRM 420 487
ENSMODP00000031808 RRM 499 563

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Anolis carolinensis ENSACAG00000013761 N 0.949
LOC100053790 Equus caballus ENSECAG00000008833 N 0.942
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.942
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.942
SPEN Loxodonta africana ENSLAFG00000004524 N 0.938
SPEN Ochotona princeps ENSOPRG00000015800 N 0.934
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.922
SPEN Gallus gallus ENSGALG00000003662 N 0.908
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.908
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.907
SPEN Bos taurus ENSBTAG00000018729 N 0.897
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.897
SPEN Cavia porcellus ENSCPOG00000014036 N 0.895
SPEN Canis familiaris ENSCAFG00000016132 N 0.895
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.893
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.893
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.893
SPEN Homo sapiens ENSG00000065526 N 0.893
SPEN Macaca mulatta ENSMMUG00000008026 N 0.889
Spen Mus musculus ENSMUSG00000040761 N 0.889
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.888
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.888
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.886
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.875
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.841
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.838
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.834
SPEN Oryzias latipes ENSORLG00000018414 N 0.819
SPEN Macropus eugenii ENSMEUG00000002422 N 0.817
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.815
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.814
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.812
SPEN Danio rerio ENSDARG00000074332 N 0.812
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.808
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.785
spen Danio rerio ENSDARG00000074245 N 0.738
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.736