SPEN (Tarsius syrichta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTSYG00000007170 T42454_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000006561 RRM 1 46
ENSTSYP00000006561 RRM 272 342
ENSTSYP00000006561 RRM 375 442
ENSTSYP00000006561 RRM 454 518

Links

Other RRM family RBPs
Other Tarsius syrichta RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Ochotona princeps ENSOPRG00000015800 N 0.984
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.976
LOC100053790 Equus caballus ENSECAG00000008833 N 0.968
SPEN Loxodonta africana ENSLAFG00000004524 N 0.964
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.960
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.957
SPEN Anolis carolinensis ENSACAG00000013761 N 0.952
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.935
SPEN Cavia porcellus ENSCPOG00000014036 N 0.932
SPEN Canis familiaris ENSCAFG00000016132 N 0.929
SPEN Monodelphis domestica ENSMODG00000003411 N 0.922
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.920
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.911
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.911
SPEN Homo sapiens ENSG00000065526 N 0.911
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.908
SPEN Macaca mulatta ENSMMUG00000008026 N 0.908
SPEN Bos taurus ENSBTAG00000018729 N 0.908
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.904
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.904
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.900
Spen Mus musculus ENSMUSG00000040761 N 0.900
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.889
SPEN Gallus gallus ENSGALG00000003662 N 0.889
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.834
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.830
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.830
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.821
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.808
SPEN Danio rerio ENSDARG00000074332 N 0.808
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.808
SPEN Oryzias latipes ENSORLG00000018414 N 0.804
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.801
SPEN Macropus eugenii ENSMEUG00000002422 N 0.800
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.789
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.746
spen Danio rerio ENSDARG00000074245 N 0.734