SPEN (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000008527 T35552_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000015735 RRM 296 366
ENSCJAP00000015788 RRM 6 70
ENSCJAP00000046060 RRM 8 74
ENSCJAP00000046060 RRM 337 407
ENSCJAP00000046060 RRM 440 507
ENSCJAP00000046060 RRM 519 583

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Bos taurus ENSBTAG00000018729 N 1.000
SPEN Homo sapiens ENSG00000065526 N 0.996
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.996
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.996
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.993
Spen Mus musculus ENSMUSG00000040761 N 0.993
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.989
SPEN Macaca mulatta ENSMMUG00000008026 N 0.989
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.986
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.982
SPEN Gallus gallus ENSGALG00000003662 N 0.982
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.937
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.926
LOC100053790 Equus caballus ENSECAG00000008833 N 0.926
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.923
SPEN Loxodonta africana ENSLAFG00000004524 N 0.923
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.919
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.919
SPEN Ochotona princeps ENSOPRG00000015800 N 0.915
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.908
SPEN Anolis carolinensis ENSACAG00000013761 N 0.900
SPEN Monodelphis domestica ENSMODG00000003411 N 0.897
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.893
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.889
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.889
SPEN Oryzias latipes ENSORLG00000018414 N 0.886
SPEN Cavia porcellus ENSCPOG00000014036 N 0.882
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.882
SPEN Danio rerio ENSDARG00000074332 N 0.882
SPEN Canis familiaris ENSCAFG00000016132 N 0.882
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.878
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.863
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.863
spen Danio rerio ENSDARG00000074245 N 0.819
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.790
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.772
SPEN Macropus eugenii ENSMEUG00000002422 N 0.745