Spen (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000040761 T39354_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000077925 RRM 8 74
ENSMUSP00000077925 RRM 339 409
ENSMUSP00000077925 RRM 442 509
ENSMUSP00000077925 RRM 521 585
ENSMUSP00000101412 RRM 8 74
ENSMUSP00000101412 RRM 339 409
ENSMUSP00000101412 RRM 442 509
ENSMUSP00000101412 RRM 521 585
ENSMUSP00000101413 RRM 8 74
ENSMUSP00000101413 RRM 339 409
ENSMUSP00000101413 RRM 442 509
ENSMUSP00000101413 RRM 521 585

Links

Other RRM family RBPs
Other Mus musculus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Bos taurus ENSBTAG00000018729 N 0.993
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.993
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.989
SPEN Homo sapiens ENSG00000065526 N 0.989
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.989
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.989
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.985
SPEN Macaca mulatta ENSMMUG00000008026 N 0.982
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.974
SPEN Gallus gallus ENSGALG00000003662 N 0.974
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.945
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.930
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.919
LOC100053790 Equus caballus ENSECAG00000008833 N 0.919
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.915
SPEN Loxodonta africana ENSLAFG00000004524 N 0.915
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.911
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.911
SPEN Ochotona princeps ENSOPRG00000015800 N 0.908
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.900
SPEN Anolis carolinensis ENSACAG00000013761 N 0.893
SPEN Monodelphis domestica ENSMODG00000003411 N 0.889
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.886
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.886
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.886
SPEN Oryzias latipes ENSORLG00000018414 N 0.882
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.878
SPEN Danio rerio ENSDARG00000074332 N 0.878
SPEN Cavia porcellus ENSCPOG00000014036 N 0.875
SPEN Canis familiaris ENSCAFG00000016132 N 0.875
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.871
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.856
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.856
spen Danio rerio ENSDARG00000074245 N 0.819
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.782
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.772
SPEN Macropus eugenii ENSMEUG00000002422 N 0.745