RBFOX2 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000015598 T37885_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
A2BP1
M298_0.6 		Homo sapiens UGCAUG SELEX
Cook et al.(2011)
37_16537540 		0.855
A2BP1
M159_0.6 		Homo sapiens WGCAUGM RNAcompete
Ray et al.(2013)
RNCMPT00168 		0.855
a2bp1
M297_0.6 		Danio rerio GCAUG SELEX
Cook et al.(2011)
36_12574126 		0.841
a2bp1
M118_0.6 		Drosophila melanogaster UGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00123 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000015221 RRM 105 173

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBFOX1 Tupaia belangeri ENSTBEG00000009169 I 0.855
RBFOX1 Spermophilus tridecemlineatus ENSSTOG00000000322 I 0.855
RBFOX1 Sus scrofa ENSSSCG00000007917 I 0.855
A2BP1 Taeniopygia guttata ENSTGUG00000004562 I 0.855
RBM9 Taeniopygia guttata ENSTGUG00000010808 I 0.855
LOC100414323 Callithrix jacchus ENSCJAG00000017351 I 0.855
RBM9 Gallus gallus ENSGALG00000012540 I 0.855
RBFOX2 Sus scrofa ENSSSCG00000000152 I 0.855
Rbm9 Rattus norvegicus ENSRNOG00000004688 I 0.855
RBFOX1 Pan troglodytes ENSPTRG00000007744 I 0.855
ENSPPYG00000011766 Pongo pygmaeus ENSPPYG00000011766 I 0.855
LOC100385643 Callithrix jacchus ENSCJAG00000019456 I 0.855
RBFOX2 Pan troglodytes ENSPTRG00000014305 I 0.855
A2bp1 Rattus norvegicus ENSRNOG00000002827 I 0.855
RBFOX1 Pteropus vampyrus ENSPVAG00000013467 I 0.855
A2BP1 Gallus gallus ENSGALG00000007366 I 0.855
RBFOX2 Cavia porcellus ENSCPOG00000022180 I 0.855
LOC100069362 Equus caballus ENSECAG00000018923 I 0.855
RBFOX2 Echinops telfairi ENSETEG00000005638 I 0.855
LOC100066233 Equus caballus ENSECAG00000012667 I 0.855
Ame_R020997 Ailuropoda melanoleuca Ame_R020997 I 0.855
RBFOX1 Dasypus novemcinctus ENSDNOG00000012760 I 0.855
Rbfox2 Dipodomys ordii ENSDORG00000015003 I 0.855
A2BP1 Homo sapiens ENSG00000078328 D 0.855
RBFOX2 Homo sapiens ENSG00000100320 I 0.855
RBFOX1 Tursiops truncatus ENSTTRG00000005700 I 0.855
RBFOX2 Tarsius syrichta ENSTSYG00000014123 I 0.855
RBFOX2 Tursiops truncatus ENSTTRG00000006922 I 0.855
RBFOX1 Vicugna pacos ENSVPAG00000001284 I 0.855
RBFOX1 Gorilla gorilla ENSGGOG00000016871 I 0.855
RBFOX2 Vicugna pacos ENSVPAG00000002824 I 0.855
ENSPPYG00000007079 Pongo pygmaeus ENSPPYG00000007079 I 0.855
RBFOX1 Cavia porcellus ENSCPOG00000011314 I 0.855
RBFOX2 Monodelphis domestica ENSMODG00000001122 I 0.855
A2D690_MACMU Macaca mulatta ENSMMUG00000014010 I 0.855
LOC708209 Macaca mulatta ENSMMUG00000003458 I 0.855
RBFOX1 Procavia capensis ENSPCAG00000002630 I 0.855
RBFOX1 Monodelphis domestica ENSMODG00000005826 I 0.855
RBM9_BOVIN Bos taurus ENSBTAG00000020125 I 0.855
Rbfox1 Mus musculus ENSMUSG00000008658 I 0.855
RBFOX1 Myotis lucifugus ENSMLUG00000015896 I 0.855
RBFOX1 Canis familiaris ENSCAFG00000019082 I 0.855
RBFOX1 Macropus eugenii ENSMEUG00000012525 I 0.855
RBFOX2 Loxodonta africana ENSLAFG00000027140 I 0.855
RBFOX1 Loxodonta africana ENSLAFG00000011480 I 0.855
RBFOX1 Choloepus hoffmanni ENSCHOG00000012843 I 0.855
RBFOX1 Meleagris gallopavo ENSMGAG00000008606 I 0.855
RBFOX2 Myotis lucifugus ENSMLUG00000002676 I 0.855
RBFOX2 Choloepus hoffmanni ENSCHOG00000002887 I 0.855
Rbfox2 Mus musculus ENSMUSG00000033565 I 0.855
RBFOX2 Canis familiaris ENSCAFG00000001701 I 0.855
RBFOX2 Otolemur garnettii ENSOGAG00000015996 I 0.855
RBFOX1 Otolemur garnettii ENSOGAG00000000363 I 0.855
RBFOX1 Ornithorhynchus anatinus ENSOANG00000002379 I 0.855
RBFOX2 Ochotona princeps ENSOPRG00000014878 I 0.855
RBFOX2 Anolis carolinensis ENSACAG00000016535 I 0.855
FOX1A_BOVIN Bos taurus ENSBTAG00000007210 I 0.855
RBFOX1 Oryctolagus cuniculus ENSOCUG00000001205 I 0.855
RBFOX1 Ochotona princeps ENSOPRG00000006199 I 0.855
RBFOX2 Ornithorhynchus anatinus ENSOANG00000007489 I 0.855
a2bp1 Danio rerio ENSDARG00000014746 D 0.841
RBFOX1 Anolis carolinensis ENSACAG00000004013 I 0.841
RBFOX2 Tupaia belangeri ENSTBEG00000003297 I 0.841
RBFOX2 Spermophilus tridecemlineatus ENSSTOG00000014841 I 0.826
CAL91350 Xenopus laevis CAL91350 I 0.826
RBFOX1 Takifugu rubripes ENSTRUG00000013477 I 0.826
A4F5G6 Xenopus laevis A4F5G6 I 0.826
CAL91351 Xenopus laevis CAL91351 I 0.826
rbm9 Xenopus tropicalis ENSXETG00000000231 I 0.826
ENSORLG00000014948 Oryzias latipes ENSORLG00000014948 I 0.812
ENSACAG00000016093 Anolis carolinensis ENSACAG00000016093 I 0.812
FP236187.1 Danio rerio ENSDARG00000010083 I 0.812
gw1.6.723.1 Daphnia pulex gw1.6.723.1 I 0.812
ENSDARG00000074310 Danio rerio ENSDARG00000074310 I 0.812
AAI69563 Xenopus laevis AAI69563 I 0.812
RBFOX3 Oryctolagus cuniculus ENSOCUG00000014217 I 0.812
AAI55921 Xenopus laevis AAI55921 I 0.812
ENSGACG00000002138 Gasterosteus aculeatus ENSGACG00000002138 I 0.812
amel4_ncbi_hmm20735 Apis mellifera amel4_ncbi_hmm20735 I 0.812
nasonia_NCBI_hmm28684 Nasonia vitripennis nasonia_NCBI_hmm28684 I 0.797
RBFOX3 Canis familiaris ENSCAFG00000005547 I 0.797
RBFOX3 Callithrix jacchus ENSCJAG00000009563 I 0.797
FOX1C_BOVIN Bos taurus ENSBTAG00000006280 I 0.797
Ame_R006420 Ailuropoda melanoleuca Ame_R006420 I 0.797
RBFOX3 Cavia porcellus ENSCPOG00000021703 I 0.797
ENSTRUG00000002748 Takifugu rubripes ENSTRUG00000002748 I 0.797
RBFOX3 Ochotona princeps ENSOPRG00000016279 I 0.797
Rbfox3 Mus musculus ENSMUSG00000025576 I 0.797
RBFOX3 Gorilla gorilla ENSGGOG00000012546 I 0.797
RBFOX3 Procavia capensis ENSPCAG00000001401 I 0.797
ENSPPYG00000008704 Pongo pygmaeus ENSPPYG00000008704 I 0.797
ENSMODG00000002089 Monodelphis domestica ENSMODG00000002089 I 0.797
RBFOX3 Macaca mulatta ENSMMUG00000023028 I 0.797
RBFOX3 Loxodonta africana ENSLAFG00000016623 I 0.797
ENSMGAG00000005600 Meleagris gallopavo ENSMGAG00000005600 I 0.797
RBFOX3 Microcebus murinus ENSMICG00000014898 I 0.797
RBFOX3 Myotis lucifugus ENSMLUG00000008895 I 0.797
RBFOX3 Pan troglodytes ENSPTRG00000009727 I 0.797
RBFOX3 Pteropus vampyrus ENSPVAG00000015243 I 0.797
RBFOX3 Homo sapiens ENSG00000167281 I 0.797
GI11474 Drosophila mojavensis FBgn0134235 I 0.797
GJ13667 Drosophila virilis FBgn0200888 I 0.797
RBFOX3 Equus caballus ENSECAG00000023811 I 0.797
PHUM098700 Pediculus humanus PHUM098700 I 0.797
hrnbp3 Xenopus tropicalis ENSXETG00000020236 I 0.797
Hrnbp3 Rattus norvegicus ENSRNOG00000003386 I 0.797
ENSGACG00000007174 Gasterosteus aculeatus ENSGACG00000007174 I 0.797
ENSTNIG00000011278 Tetraodon nigroviridis ENSTNIG00000011278 I 0.797
ENSTRUG00000004894 Takifugu rubripes ENSTRUG00000004894 I 0.797
RBFOX3 Erinaceus europaeus ENSEEUG00000013974 I 0.783
GF10597 Drosophila ananassae FBgn0087638 I 0.783
GH14949 Drosophila grimshawi FBgn0122424 I 0.783
GM25214 Drosophila sechellia FBgn0180074 I 0.783
GD14245 Drosophila simulans FBgn0185930 I 0.783
GK12272 Drosophila willistoni FBgn0214282 I 0.783
GG15438 Drosophila erecta FBgn0107689 I 0.783
a2bp1 Drosophila melanogaster FBgn0052062 D 0.783
ENSORLG00000011269 Oryzias latipes ENSORLG00000011269 I 0.783
ENSTNIG00000008088 Tetraodon nigroviridis ENSTNIG00000008088 I 0.783
ENSTRUG00000007739 Takifugu rubripes ENSTRUG00000007739 I 0.783
ENSTRUG00000015905 Takifugu rubripes ENSTRUG00000015905 I 0.783
ENSACAG00000011931 Anolis carolinensis ENSACAG00000011931 I 0.783
GE21749 Drosophila yakuba FBgn0238995 I 0.783
AGAP006089 Anopheles gambiae AGAP006089 I 0.783
DGIL_AUG5s15027g5t1 Acyrtosiphon pisum DGIL_AUG5s15027g5t1 I 0.783
AAEL017168 Aedes aegypti AAEL017168 I 0.783
BGIBMGA006880 Bombyx mori BGIBMGA006880 I 0.768
ENSGACG00000010757 Gasterosteus aculeatus ENSGACG00000010757 I 0.768
GA23828-RA Drosophila pseudoobscura FBgn0245227 I 0.768
rbfox1l Danio rerio ENSDARG00000021184 I 0.768
e_gw.534.13.1 Branchiostoma floridae e_gw.534.13.1 I 0.768
e_gw.493.13.1 Branchiostoma floridae e_gw.493.13.1 I 0.768
ISCW013123 Ixodes scapularis ISCW013123 I 0.768
ENSGACG00000015968 Gasterosteus aculeatus ENSGACG00000015968 I 0.754
e_gw1.11.67.1 Lottia gigantea e_gw1.11.67.1 I 0.714
gw1.3.244.1 Capitella teleta gw1.3.244.1 I 0.710