gw1.3.244.1 (Capitella teleta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.3.244.1 T53229_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
A2BP1
M298_0.6 		Homo sapiens UGCAUG SELEX
Cook et al.(2011)
37_16537540 		0.841
a2bp1
M297_0.6 		Danio rerio GCAUG SELEX
Cook et al.(2011)
36_12574126 		0.841
A2BP1
M159_0.6 		Homo sapiens WGCAUGM RNAcompete
Ray et al.(2013)
RNCMPT00168 		0.841
a2bp1
M118_0.6 		Drosophila melanogaster UGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00123 		0.841
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.3.244.1 RRM 4 72

Links

Other RRM family RBPs
Other Capitella teleta RBPs

142 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.11.67.1 Lottia gigantea e_gw1.11.67.1 I 0.886
Smp_139980 Schistosoma mansoni Smp_139980 I 0.870
RBFOX3 Pan troglodytes ENSPTRG00000009727 I 0.855
RBFOX3 Equus caballus ENSECAG00000023811 I 0.855
ENSPPYG00000008704 Pongo pygmaeus ENSPPYG00000008704 I 0.855
Hrnbp3 Rattus norvegicus ENSRNOG00000003386 I 0.855
RBFOX3 Canis familiaris ENSCAFG00000005547 I 0.855
RBFOX3 Callithrix jacchus ENSCJAG00000009563 I 0.855
RBFOX3 Procavia capensis ENSPCAG00000001401 I 0.855
RBFOX3 Pteropus vampyrus ENSPVAG00000015243 I 0.855
RBFOX3 Homo sapiens ENSG00000167281 I 0.855
RBFOX3 Macaca mulatta ENSMMUG00000023028 I 0.855
RBFOX3 Microcebus murinus ENSMICG00000014898 I 0.855
RBFOX3 Myotis lucifugus ENSMLUG00000008895 I 0.855
RBFOX3 Loxodonta africana ENSLAFG00000016623 I 0.855
Rbfox3 Mus musculus ENSMUSG00000025576 I 0.855
FOX1C_BOVIN Bos taurus ENSBTAG00000006280 I 0.855
RBFOX3 Gorilla gorilla ENSGGOG00000012546 I 0.855
RBFOX3 Ochotona princeps ENSOPRG00000016279 I 0.855
RBFOX3 Cavia porcellus ENSCPOG00000021703 I 0.855
AAEL017168 Aedes aegypti AAEL017168 I 0.855
Ame_R006420 Ailuropoda melanoleuca Ame_R006420 I 0.855
ISCW013123 Ixodes scapularis ISCW013123 I 0.855
RBFOX1 Otolemur garnettii ENSOGAG00000000363 I 0.841
RBFOX3 Oryctolagus cuniculus ENSOCUG00000014217 I 0.841
RBFOX1 Oryctolagus cuniculus ENSOCUG00000001205 I 0.841
RBFOX2 Otolemur garnettii ENSOGAG00000015996 I 0.841
GH14949 Drosophila grimshawi FBgn0122424 I 0.841
GF10597 Drosophila ananassae FBgn0087638 I 0.841
GG15438 Drosophila erecta FBgn0107689 I 0.841
RBFOX2 Ochotona princeps ENSOPRG00000014878 I 0.841
RBFOX2 Ornithorhynchus anatinus ENSOANG00000007489 I 0.841
RBFOX1 Ochotona princeps ENSOPRG00000006199 I 0.841
RBFOX1 Ornithorhynchus anatinus ENSOANG00000002379 I 0.841
ENSMODG00000002089 Monodelphis domestica ENSMODG00000002089 I 0.841
RBFOX2 Monodelphis domestica ENSMODG00000001122 I 0.841
GE21749 Drosophila yakuba FBgn0238995 I 0.841
A2D690_MACMU Macaca mulatta ENSMMUG00000014010 I 0.841
RBFOX1 Monodelphis domestica ENSMODG00000005826 I 0.841
Rbfox1 Mus musculus ENSMUSG00000008658 I 0.841
RBFOX1 Procavia capensis ENSPCAG00000002630 I 0.841
Rbfox2 Mus musculus ENSMUSG00000033565 I 0.841
GD14245 Drosophila simulans FBgn0185930 I 0.841
GK12272 Drosophila willistoni FBgn0214282 I 0.841
GM25214 Drosophila sechellia FBgn0180074 I 0.841
a2bp1 Drosophila melanogaster FBgn0052062 D 0.841
RBFOX1 Tupaia belangeri ENSTBEG00000009169 I 0.841
RBFOX1 Spermophilus tridecemlineatus ENSSTOG00000000322 I 0.841
RBFOX1 Sus scrofa ENSSSCG00000007917 I 0.841
RBFOX2 Tursiops truncatus ENSTTRG00000006922 I 0.841
A2BP1 Taeniopygia guttata ENSTGUG00000004562 I 0.841
RBFOX1 Tursiops truncatus ENSTTRG00000005700 I 0.841
RBFOX2 Tarsius syrichta ENSTSYG00000014123 I 0.841
ENSTRUG00000004894 Takifugu rubripes ENSTRUG00000004894 I 0.841
ENSTNIG00000011278 Tetraodon nigroviridis ENSTNIG00000011278 I 0.841
RBM9 Taeniopygia guttata ENSTGUG00000010808 I 0.841
RBFOX2 Sus scrofa ENSSSCG00000000152 I 0.841
Rbm9 Rattus norvegicus ENSRNOG00000004688 I 0.841
RBFOX1 Pan troglodytes ENSPTRG00000007744 I 0.841
ENSPPYG00000011766 Pongo pygmaeus ENSPPYG00000011766 I 0.841
hrnbp3 Xenopus tropicalis ENSXETG00000020236 I 0.841
ENSPPYG00000007079 Pongo pygmaeus ENSPPYG00000007079 I 0.841
RBFOX2 Vicugna pacos ENSVPAG00000002824 I 0.841
RBFOX2 Pan troglodytes ENSPTRG00000014305 I 0.841
RBFOX1 Vicugna pacos ENSVPAG00000001284 I 0.841
gw1.6.723.1 Daphnia pulex gw1.6.723.1 I 0.841
A2bp1 Rattus norvegicus ENSRNOG00000002827 I 0.841
RBFOX1 Pteropus vampyrus ENSPVAG00000013467 I 0.841
RBFOX1 Takifugu rubripes ENSTRUG00000013477 I 0.841
LOC708209 Macaca mulatta ENSMMUG00000003458 I 0.841
RBFOX1 Cavia porcellus ENSCPOG00000011314 I 0.841
LOC100385643 Callithrix jacchus ENSCJAG00000019456 I 0.841
LOC100414323 Callithrix jacchus ENSCJAG00000017351 I 0.841
RBFOX1 Myotis lucifugus ENSMLUG00000015896 I 0.841
RBFOX2 Cavia porcellus ENSCPOG00000022180 I 0.841
FP236187.1 Danio rerio ENSDARG00000010083 I 0.841
Rbfox2 Dipodomys ordii ENSDORG00000015003 I 0.841
RBFOX1 Dasypus novemcinctus ENSDNOG00000012760 I 0.841
ENSDARG00000074310 Danio rerio ENSDARG00000074310 I 0.841
a2bp1 Danio rerio ENSDARG00000014746 D 0.841
RBFOX2 Choloepus hoffmanni ENSCHOG00000002887 I 0.841
RBFOX1 Canis familiaris ENSCAFG00000019082 I 0.841
AGAP006089 Anopheles gambiae AGAP006089 I 0.841
amel4_ncbi_hmm20735 Apis mellifera amel4_ncbi_hmm20735 I 0.841
Ame_R020997 Ailuropoda melanoleuca Ame_R020997 I 0.841
BGIBMGA006880 Bombyx mori BGIBMGA006880 I 0.841
ENSACAG00000016093 Anolis carolinensis ENSACAG00000016093 I 0.841
RBFOX2 Anolis carolinensis ENSACAG00000016535 I 0.841
RBFOX2 Canis familiaris ENSCAFG00000001701 I 0.841
RBM9_BOVIN Bos taurus ENSBTAG00000020125 I 0.841
FOX1A_BOVIN Bos taurus ENSBTAG00000007210 I 0.841
LOC100066233 Equus caballus ENSECAG00000012667 I 0.841
RBFOX1 Choloepus hoffmanni ENSCHOG00000012843 I 0.841
RBFOX1 Loxodonta africana ENSLAFG00000011480 I 0.841
RBFOX1 Gorilla gorilla ENSGGOG00000016871 I 0.841
RBM9 Gallus gallus ENSGALG00000012540 I 0.841
LOC100069362 Equus caballus ENSECAG00000018923 I 0.841
RBFOX1 Macropus eugenii ENSMEUG00000012525 I 0.841
RBFOX2 Myotis lucifugus ENSMLUG00000002676 I 0.841
RBFOX1 Meleagris gallopavo ENSMGAG00000008606 I 0.841
ENSMGAG00000005600 Meleagris gallopavo ENSMGAG00000005600 I 0.841
A2BP1 Gallus gallus ENSGALG00000007366 I 0.841
RBFOX2 Loxodonta africana ENSLAFG00000027140 I 0.841
RBFOX2 Echinops telfairi ENSETEG00000005638 I 0.841
RBFOX2 Homo sapiens ENSG00000100320 I 0.841
ENSGACG00000002138 Gasterosteus aculeatus ENSGACG00000002138 I 0.841
A2BP1 Homo sapiens ENSG00000078328 D 0.841
ENSGACG00000010757 Gasterosteus aculeatus ENSGACG00000010757 I 0.826
RBFOX1 Anolis carolinensis ENSACAG00000004013 I 0.826
GI11474 Drosophila mojavensis FBgn0134235 I 0.826
nasonia_NCBI_hmm28684 Nasonia vitripennis nasonia_NCBI_hmm28684 I 0.826
rbm9 Xenopus tropicalis ENSXETG00000000231 I 0.826
CAL91350 Xenopus laevis CAL91350 I 0.826
DGIL_AUG5s15027g5t1 Acyrtosiphon pisum DGIL_AUG5s15027g5t1 I 0.826
RBFOX3 Erinaceus europaeus ENSEEUG00000013974 I 0.826
A4F5G6 Xenopus laevis A4F5G6 I 0.826
GA23828-RA Drosophila pseudoobscura FBgn0245227 I 0.826
CAL91351 Xenopus laevis CAL91351 I 0.826
RBFOX2 Tupaia belangeri ENSTBEG00000003297 I 0.826
GJ13667 Drosophila virilis FBgn0200888 I 0.826
PHUM098700 Pediculus humanus PHUM098700 I 0.826
Smp_138880 Schistosoma mansoni Smp_138880 I 0.812
AAI69563 Xenopus laevis AAI69563 I 0.812
AAI55921 Xenopus laevis AAI55921 I 0.812
Sjc_0036900 Schistosoma japonicum Sjc_0036900 I 0.812
rbfox1l Danio rerio ENSDARG00000021184 I 0.812
ENSTNIG00000008088 Tetraodon nigroviridis ENSTNIG00000008088 I 0.812
e_gw.493.13.1 Branchiostoma floridae e_gw.493.13.1 I 0.812
ENSTRUG00000015905 Takifugu rubripes ENSTRUG00000015905 I 0.812
e_gw.534.13.1 Branchiostoma floridae e_gw.534.13.1 I 0.812
ENSACAG00000011931 Anolis carolinensis ENSACAG00000011931 I 0.812
ENSORLG00000011269 Oryzias latipes ENSORLG00000011269 I 0.812
ENSTRUG00000002748 Takifugu rubripes ENSTRUG00000002748 I 0.797
ENSORLG00000014948 Oryzias latipes ENSORLG00000014948 I 0.797
ENSGACG00000007174 Gasterosteus aculeatus ENSGACG00000007174 I 0.797
ENSTRUG00000007739 Takifugu rubripes ENSTRUG00000007739 I 0.783
87505 Helobdella robusta 87505 I 0.754
ENSGACG00000015968 Gasterosteus aculeatus ENSGACG00000015968 I 0.754
RBFOX2 Macropus eugenii ENSMEUG00000001547 I 0.725
ENSCING00000013912 Ciona intestinalis ENSCING00000013912 I 0.710
RBFOX2 Gorilla gorilla ENSGGOG00000015598 I 0.710
136459 Helobdella robusta 136459 N 0.710