ENSOCUG00000028110 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000028110 T39792_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.819
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.819
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.819
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.819
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000021399 RRM 12 80

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Fusip1 Homo sapiens ENSG00000188529 D 0.819
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.819
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.819
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.819
BX511012.1 Homo sapiens ENSG00000215699 I 0.819
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.819
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.819
Srsf10 Mus musculus ENSMUSG00000028676 I 0.819
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.819
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.819
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.819
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.819
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.819
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.819
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.819
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.819
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.819
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.808
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.808
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.808
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.808
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.806
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.806
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.803
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.792
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.792
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.792
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.792
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.792
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.789
Srsf12 Mus musculus ENSMUSG00000054679 I 0.775
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.775
SRSF12 Homo sapiens ENSG00000154548 I 0.775
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.775
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.764
AAH46695 Xenopus laevis AAH46695 I 0.761
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.750
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.750
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.750
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.750
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.750
AAH84231 Xenopus laevis AAH84231 I 0.746
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.736
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.736
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.732
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.732
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.722
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.722
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.720
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.718