AAH46695 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH46695 T59483_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.930
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.930
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.930
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.930
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH46695 RRM 12 82

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.904
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.904
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.904
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.904
Srsf10 Mus musculus ENSMUSG00000028676 I 0.903
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.903
BX511012.1 Homo sapiens ENSG00000215699 I 0.903
Fusip1 Homo sapiens ENSG00000188529 D 0.903
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.903
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.903
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.903
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.903
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.903
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.903
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.903
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.903
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.903
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.903
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.903
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.903
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.903
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.889
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.889
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.889
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.889
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.875
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.875
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.873
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.861
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.847
Srsf12 Mus musculus ENSMUSG00000054679 I 0.845
AAH84231 Xenopus laevis AAH84231 I 0.845
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.845
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.845
CR293507.1 Danio rerio ENSDARG00000022415 I 0.833
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.831
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.831
SRSF12 Homo sapiens ENSG00000154548 I 0.831
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.831
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.808
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.808
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.806
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.806
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.806
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.806
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.806
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.806
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.803
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.792
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.792
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.792
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.792
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.792
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.778
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.778
ENSCSAVG00000005130 Ciona savignyi ENSCSAVG00000005130 I 0.775
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.773
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.764
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.764
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.761
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.750
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.746
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.718
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.708
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.708
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.708
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.708
LOC100070965 Equus caballus ENSECAG00000019135 I 0.708
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.708
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.704