SRSF12 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000018415 T40761_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.861
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.861
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.861
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.861
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000031459 RRM 12 83

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF12 Homo sapiens ENSG00000154548 I 1.000
SRSF12 Macaca mulatta ENSMMUG00000014941 I 1.000
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.986
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.986
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.986
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.986
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.972
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.958
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.958
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.958
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.931
Srsf12 Mus musculus ENSMUSG00000054679 I 0.931
AAH84231 Xenopus laevis AAH84231 I 0.903
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.889
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.875
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.867
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.861
LOC100070965 Equus caballus ENSECAG00000019135 I 0.861
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.861
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.861
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.861
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.861
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.861
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.861
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.849
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.849
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.849
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.849
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.847
SRSF12 Sorex araneus ENSSARG00000007795 I 0.847
CR293507.1 Danio rerio ENSDARG00000022415 I 0.847
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.847
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.847
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.847
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.847
BX511012.1 Homo sapiens ENSG00000215699 I 0.836
Fusip1 Homo sapiens ENSG00000188529 D 0.836
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.836
Srsf10 Mus musculus ENSMUSG00000028676 I 0.836
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.836
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.836
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.836
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.836
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.836
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.836
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.836
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.836
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.836
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.836
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.836
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.836
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.836
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.833
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.833
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.833
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.833
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.822
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.819
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.819
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.808
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.808
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.808
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.795
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.792
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.792
AAH46695 Xenopus laevis AAH46695 I 0.792
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.792
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.764
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.750
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.750
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.750
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.740
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.736
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.736
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.736
ENSCSAVG00000005130 Ciona savignyi ENSCSAVG00000005130 I 0.722
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.712
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.708