ENSCJAG00000021801 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000021801 T35697_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.944
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.944
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.944
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.944
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000043095 RRM 12 82

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.918
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.918
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.918
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.918
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.917
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.917
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.917
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.917
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.917
Srsf10 Mus musculus ENSMUSG00000028676 I 0.917
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.917
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.917
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.917
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.917
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.917
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.917
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.917
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.917
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.917
Fusip1 Homo sapiens ENSG00000188529 D 0.917
BX511012.1 Homo sapiens ENSG00000215699 I 0.917
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.903
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.903
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.903
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.903
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.889
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.889
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.875
AAH46695 Xenopus laevis AAH46695 I 0.873
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.861
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.859
Srsf12 Mus musculus ENSMUSG00000054679 I 0.859
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.859
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.859
SRSF12 Homo sapiens ENSG00000154548 I 0.859
AAH84231 Xenopus laevis AAH84231 I 0.845
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.845
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.833
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.833
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.833
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.833
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.833
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.831
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.819
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.819
CR293507.1 Danio rerio ENSDARG00000022415 I 0.806
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.806
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.806
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.803
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.803
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.800
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.792
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.792
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.781
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.781
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.778
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.764
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.764
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.764
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.750
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.746
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.736
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.732
LOC100070965 Equus caballus ENSECAG00000019135 I 0.722
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.722
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.722
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.722
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.722
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.718
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.708
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.708
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.708
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.708
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.708
SRSF12 Sorex araneus ENSSARG00000007795 I 0.708
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.708
ENSCSAVG00000005130 Ciona savignyi ENSCSAVG00000005130 I 0.704
Ame_R019011 Ailuropoda melanoleuca Ame_R019011 I 0.704