ENSCJAG00000010608 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000010608 T35577_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.915
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.915
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.915
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.915
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000048944 RRM 13 81

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.890
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.890
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.890
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.890
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.889
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.889
Srsf10 Mus musculus ENSMUSG00000028676 I 0.889
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.889
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.889
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.889
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.889
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.889
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.889
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.889
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.889
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.889
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.889
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.889
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.889
Fusip1 Homo sapiens ENSG00000188529 D 0.889
BX511012.1 Homo sapiens ENSG00000215699 I 0.889
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.875
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.875
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.875
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.875
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.875
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.861
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.861
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.859
AAH46695 Xenopus laevis AAH46695 I 0.845
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.833
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.831
SRSF12 Homo sapiens ENSG00000154548 I 0.831
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.817
Srsf12 Mus musculus ENSMUSG00000054679 I 0.817
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.817
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.817
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.814
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.814
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.814
AAH84231 Xenopus laevis AAH84231 I 0.803
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.800
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.792
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.792
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.792
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.792
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.792
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.792
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.792
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.789
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.789
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.786
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.786
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.783
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.781
CR293507.1 Danio rerio ENSDARG00000022415 I 0.778
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.771
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.767
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.764
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.760
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.750
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.743
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.739
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.729
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.729
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.729
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.729
LOC100070965 Equus caballus ENSECAG00000019135 I 0.729
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.725
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.714
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.714
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.714
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.714
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.714
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.714
SRSF12 Sorex araneus ENSSARG00000007795 I 0.714
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.700