Srsf12 (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000054679 T39385_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.901
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.901
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.901
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.901
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000103794 RRM 12 82

Links

Other RRM family RBPs
Other Mus musculus RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Srrp Rattus norvegicus ENSRNOG00000024247 I 1.000
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.972
SRSF12 Homo sapiens ENSG00000154548 I 0.972
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.944
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.944
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.944
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.944
AAH84231 Xenopus laevis AAH84231 I 0.944
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.931
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.931
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.931
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.917
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.917
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.880
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.877
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.877
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.877
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.877
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.875
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.875
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.875
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.875
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.875
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.875
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.875
Srsf10 Mus musculus ENSMUSG00000028676 I 0.875
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.875
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.875
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.875
Fusip1 Homo sapiens ENSG00000188529 D 0.875
BX511012.1 Homo sapiens ENSG00000215699 I 0.875
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.875
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.875
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.875
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.875
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.861
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.861
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.861
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.859
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.859
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.847
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.847
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.847
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.847
AAH46695 Xenopus laevis AAH46695 I 0.845
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.836
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.836
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.833
CR293507.1 Danio rerio ENSDARG00000022415 I 0.833
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.819
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.819
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.817
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.817
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.806
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.806
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.806
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.806
LOC100070965 Equus caballus ENSECAG00000019135 I 0.806
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.803
SRSF12 Sorex araneus ENSSARG00000007795 I 0.792
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.792
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.792
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.792
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.792
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.792
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.792
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.789
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.789
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.778
ENSCSAVG00000005130 Ciona savignyi ENSCSAVG00000005130 I 0.775
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.775
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.764
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.750
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.750
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.736
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.722
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.722
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.704