62054 (Helobdella robusta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 62054 T48811_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.764
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
62054 RRM 21 89
62054 RRM 268 338

Links

Other RRM family RBPs
Other Helobdella robusta RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.800
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.800
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.793
CELF6 Oryzias latipes ENSORLG00000013392 I 0.793
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.793
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.793
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.786
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.786
AGAP004950 Anopheles gambiae AGAP004950 I 0.786
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.786
AAEL014033 Aedes aegypti AAEL014033 I 0.786
PHUM315130 Pediculus humanus PHUM315130 I 0.779
Smp_041280 Schistosoma mansoni Smp_041280 I 0.779
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.771
GG13757 Drosophila erecta FBgn0106020 I 0.764
GF10965 Drosophila ananassae FBgn0088005 I 0.764
GM24582 Drosophila sechellia FBgn0179445 I 0.764
GE20053 Drosophila yakuba FBgn0237378 I 0.764
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.764
bru-3 Drosophila melanogaster FBgn0262350 D 0.764
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.764
GH14684 Drosophila grimshawi FBgn0122160 I 0.764
GK17101 Drosophila willistoni FBgn0219100 I 0.764
GI13095 Drosophila mojavensis FBgn0135852 I 0.764
GD12651 Drosophila simulans FBgn0184378 I 0.764
GJ13842 Drosophila virilis FBgn0201061 I 0.764
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.757
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.757
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.757
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.757
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.757
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.757
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.757
LOAG_05508 Loa loa LOAG_05508 I 0.757
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.752
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.750
Celf6 Mus musculus ENSMUSG00000032297 I 0.750
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.750
90208 Helobdella robusta 90208 I 0.745
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.743
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.743
HEXA Macaca mulatta ENSMMUG00000010687 I 0.743
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.743
GL21647 Drosophila persimilis FBgn0159240 I 0.743
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.743
BRUNOL6 Homo sapiens ENSG00000140488 D 0.743
Smp_131780 Schistosoma mansoni Smp_131780 I 0.736
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.736
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.729
CJA07020 Caenorhabditis japonica CJA07020 I 0.721
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.721