CELF5 (Ochotona princeps)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOPRG00000007881 T39983_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.801
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000007216 RRM 4 70
ENSOPRP00000007216 RRM 269 339

Links

Other RRM family RBPs
Other Ochotona princeps RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.950
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.950
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.929
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.929
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.907
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.857
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.857
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.857
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.850
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.850
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.850
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.850
PHUM315130 Pediculus humanus PHUM315130 I 0.843
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.842
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.836
CELF6 Oryzias latipes ENSORLG00000013392 I 0.829
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.829
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.829
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.821
GK17101 Drosophila willistoni FBgn0219100 I 0.821
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.820
GL21647 Drosophila persimilis FBgn0159240 I 0.819
bru-3 Drosophila melanogaster FBgn0262350 D 0.814
AGAP004950 Anopheles gambiae AGAP004950 I 0.814
GM24582 Drosophila sechellia FBgn0179445 I 0.814
AAEL014033 Aedes aegypti AAEL014033 I 0.814
GG13757 Drosophila erecta FBgn0106020 I 0.814
GF10965 Drosophila ananassae FBgn0088005 I 0.814
GD12651 Drosophila simulans FBgn0184378 I 0.814
GE20053 Drosophila yakuba FBgn0237378 I 0.814
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.813
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.813
HEXA Macaca mulatta ENSMMUG00000010687 I 0.813
BRUNOL6 Homo sapiens ENSG00000140488 D 0.813
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.807
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.807
Celf6 Mus musculus ENSMUSG00000032297 I 0.807
GI13095 Drosophila mojavensis FBgn0135852 I 0.807
GH14684 Drosophila grimshawi FBgn0122160 I 0.807
GJ13842 Drosophila virilis FBgn0201061 I 0.807
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.779
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.771
LOAG_05508 Loa loa LOAG_05508 I 0.771
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.771
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.764
Smp_041280 Schistosoma mansoni Smp_041280 I 0.757
CELF5 Felis catus ENSFCAG00000007127 N 0.750
62054 Helobdella robusta 62054 I 0.743
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.741
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.721
Smp_131780 Schistosoma mansoni Smp_131780 I 0.707
CJA07020 Caenorhabditis japonica CJA07020 I 0.707
90208 Helobdella robusta 90208 I 0.702
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.700