LOAG_05508 (Loa loa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOAG_05508 T29614_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
LOAG_05508T0 RRM 27 95
LOAG_05508T0 RRM 392 462

Links

Other RRM family RBPs
Other Loa loa RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.814
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.814
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.814
AGAP004950 Anopheles gambiae AGAP004950 I 0.814
PHUM315130 Pediculus humanus PHUM315130 I 0.814
AAEL014033 Aedes aegypti AAEL014033 I 0.814
GF10965 Drosophila ananassae FBgn0088005 I 0.807
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.807
GG13757 Drosophila erecta FBgn0106020 I 0.807
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.807
GK17101 Drosophila willistoni FBgn0219100 I 0.807
bru-3 Drosophila melanogaster FBgn0262350 D 0.807
GE20053 Drosophila yakuba FBgn0237378 I 0.807
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.807
GD12651 Drosophila simulans FBgn0184378 I 0.807
GM24582 Drosophila sechellia FBgn0179445 I 0.807
CELF6 Oryzias latipes ENSORLG00000013392 I 0.807
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.807
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.807
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.807
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.807
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.801
GH14684 Drosophila grimshawi FBgn0122160 I 0.800
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.800
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.800
GI13095 Drosophila mojavensis FBgn0135852 I 0.800
GJ13842 Drosophila virilis FBgn0201061 I 0.800
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.800
CJA07020 Caenorhabditis japonica CJA07020 I 0.800
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.800
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.800
GL21647 Drosophila persimilis FBgn0159240 I 0.793
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.793
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.793
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.786
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.786
Smp_041280 Schistosoma mansoni Smp_041280 I 0.779
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.779
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.771
62054 Helobdella robusta 62054 I 0.757
Celf6 Mus musculus ENSMUSG00000032297 I 0.750
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.750
90208 Helobdella robusta 90208 I 0.745
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.743
BRUNOL6 Homo sapiens ENSG00000140488 D 0.743
HEXA Macaca mulatta ENSMMUG00000010687 I 0.743
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.743
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.736
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.736
Smp_131780 Schistosoma mansoni Smp_131780 I 0.736
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.729
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.729
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.729
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.721
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.721
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.721
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.721
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.707
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.707
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.700