e_gw1.18.2245.1 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.18.2245.1 T49828_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.18.2245.1 RRM 19 89

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.958
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.958
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.944
NCU02467 Neurospora crassa NCU02467 N 0.944
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.944
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.944
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.944
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.930
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.915
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.915
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.915
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.901
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.901
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.887
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.887
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.873
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.859
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.831
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.817
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.803
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.803
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.803
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.803
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.789
An07g05140 Aspergillus niger CADANGAG00005786 N 0.789
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.789
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.789
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.789
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.775
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.775
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.761
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.761
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.761
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.761
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.746
TERG_07863 Trichophyton rubrum TERG_07863 N 0.746
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.746
AB08288.1 Alternaria brassicicola AB08288.1 N 0.746
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.746
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.746
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.746
MCYG_01624 Microsporum canis MCYG_01624 N 0.746
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.746
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.732
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.732
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.732
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.732
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.718
SAKL0F04400g Lachancea kluyveri SAKL0F04400g N 0.718