gw1.5.1175.1 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.5.1175.1 T53303_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.5.1175.1 RRM 35 105

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.986
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.958
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.944
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.944
NCU02467 Neurospora crassa NCU02467 N 0.944
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.944
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.930
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.930
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.915
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.915
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.901
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.901
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.873
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.859
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.845
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.845
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.845
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.845
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.831
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.817
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.817
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.803
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.803
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.803
An07g05140 Aspergillus niger CADANGAG00005786 N 0.789
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.789
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.789
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.775
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.775
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.775
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.775
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.775
AB08288.1 Alternaria brassicicola AB08288.1 N 0.775
MCYG_01624 Microsporum canis MCYG_01624 N 0.761
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.761
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.761
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.761
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.761
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.761
TERG_07863 Trichophyton rubrum TERG_07863 N 0.761
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.761
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.761
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.746
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.746
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.746
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.732
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.732
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.718
SAKL0F04400g Lachancea kluyveri SAKL0F04400g N 0.718
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.704
KLLA0D13420g Kluyveromyces lactis KLLA0D13420g N 0.704